RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 IGHV3-43DP0DP04 118 aa10.65□□□□□ -0.71
COLCA1-201ENST00000355430 MDH2P40926 338 aaKnown RBP10.65□□□□□ -0.71
COLCA1-201ENST00000355430 ERHP84090 104 aaKnown RBP10.65□□□□□ -0.71
COLCA1-201ENST00000355430 SRSF3P84103 164 aaKnown RBP10.65□□□□□ -0.71
COLCA1-201ENST00000355430 EIF4E3Q8N5X7 224 aaKnown RBP10.65□□□□□ -0.71
COLCA1-201ENST00000355430 MRGPRFQ96AM1 343 aa10.65□□□□□ -0.71
COLCA1-201ENST00000355430 PACRGQ96M98 296 aaPredicted RBP10.65□□□□□ -0.71
COLCA1-201ENST00000355430 TXN2Q99757 166 aa10.65□□□□□ -0.71
COLCA1-201ENST00000355430 REG4Q9BYZ8 158 aa10.65□□□□□ -0.71
COLCA1-201ENST00000355430 SEC16AO15027 2179 aa10.65□□□□□ -0.71
COLCA1-201ENST00000355430 ALPK2Q86TB3 2170 aa10.65□□□□□ -0.71
COLCA1-201ENST00000355430 PPP1CCP36873 323 aaKnown RBP10.64□□□□□ -0.71
COLCA1-201ENST00000355430 OR1K1Q8NGR3 316 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 RFESDQ8TAC1 157 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 HIST1H2BAQ96A08 127 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 SIRT7Q9NRC8 400 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 TNFRSF19Q9NS68 423 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 HIF1ANQ9NWT6 349 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 CARHSP1Q9Y2V2 147 aaKnown RBP10.64□□□□□ -0.71
COLCA1-201ENST00000355430 MSRB2Q9Y3D2 182 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 TIAF1O95411 115 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 FAM27BQ5VT28 67 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 TIPARPQ7Z3E1 657 aaKnown RBP10.64□□□□□ -0.71
COLCA1-201ENST00000355430 C1QL2Q7Z5L3 287 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 HOXB1P14653 301 aaPredicted RBP10.64□□□□□ -0.71
COLCA1-201ENST00000355430 CFHR1Q03591 330 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 BSXQ3C1V8 233 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 GPHA2Q96T91 129 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 ZNF331Q9NQX6 463 aaPredicted RBP10.64□□□□□ -0.71
COLCA1-201ENST00000355430 CLN8Q9UBY8 286 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 TRAF3IP2O43734 574 aaPredicted RBP10.64□□□□□ -0.71
COLCA1-201ENST00000355430 ZNF735P0CB33 412 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 PAX6P26367 422 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 G0S2P27469 103 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 Q3ZCU0 254 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 FAM78BQ5VT40 261 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 SIGLECL1Q8N7X8 197 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 DPF1Q92782 380 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 RTN4RQ9BZR6 473 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 OR6C3Q9NZP0 311 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 PSG11Q9UQ72 335 aa10.64□□□□□ -0.71
COLCA1-201ENST00000355430 B4DEV8 164 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 IFNL4K9M1U5 179 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 DVL1O14640 695 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 OR7C2O60412 319 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 MELTFP08582 738 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 NTF3P20783 257 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 MDKP21741 143 aaPredicted RBP10.63□□□□□ -0.71
COLCA1-201ENST00000355430 OR3A1P47881 315 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 PSG4Q00888 419 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 ZNF488Q96MN9 340 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 PRSS50Q9UI38 385 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 VAX2Q9UIW0 290 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 HEATR5BQ9P2D3 2071 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 FNDC1Q4ZHG4 1894 aaPredicted RBP10.63□□□□□ -0.71
COLCA1-201ENST00000355430 LY6DQ14210 128 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 MOGAT3Q86VF5 341 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 TMEM252Q8N6L7 170 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 RTBDNQ9BSG5 229 aaPredicted RBP10.63□□□□□ -0.71
COLCA1-201ENST00000355430 TMEM147Q9BVK8 224 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 SPTA1P02549 2419 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 TMPRSS2O15393 492 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 CDC34P49427 236 aaPredicted RBP10.63□□□□□ -0.71
COLCA1-201ENST00000355430 RAB7AP51149 207 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 NHLH1Q02575 133 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 FAM209BQ5JX69 171 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 MDP1Q86V88 176 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 OR2W1Q9Y3N9 320 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 M0R1X1 148 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 CXorf66Q5JRM2 361 aaPredicted RBP10.63□□□□□ -0.71
COLCA1-201ENST00000355430 Q96M66 194 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 HSF4Q9ULV5 492 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 A0A087X0M5 115 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 A0A1B0GX30 115 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 FCGR3BO75015 233 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 PTBP3O95758 552 aaKnown RBP10.63□□□□□ -0.71
COLCA1-201ENST00000355430 PDLIM4P50479 330 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 TMEM222Q9H0R3 208 aa10.63□□□□□ -0.71
COLCA1-201ENST00000355430 SCTP09683 121 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 DANCRP0C864 163 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 PMELP40967 661 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 TMEM187Q14656 261 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 IQCJQ1A5X6 159 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 TIGITQ495A1 244 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 PHYHD1Q5SRE7 291 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 FNDC7Q5VTL7 733 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 SLC35D1Q9NTN3 355 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 H0Y8G0 127 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 RAMP1O60894 148 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 OR10A7Q8NGE5 316 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 FAM57AQ8TBR7 257 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 MRGPRDQ8TDS7 321 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 MOB3AQ96BX8 217 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 NEIL1Q96FI4 390 aaPredicted RBP10.62□□□□□ -0.71
COLCA1-201ENST00000355430 ZNF665Q9H7R5 613 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 Q9N2K0 584 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 H0YL77 283 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 TPPP2P59282 170 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 KRTDAPP60985 99 aa10.62□□□□□ -0.71
COLCA1-201ENST00000355430 RNF126Q9BV68 326 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms