RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 STPG3Q8N7X2 389 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 HSF4Q9ULV5 492 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 K7N7A8 449 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 CD74P04233 296 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 OR1K1Q8NGR3 316 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 PKIAP61925 76 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 PIGYQ3MUY2 71 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 HIKESHIQ53FT3 197 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 RBFOX2O43251 390 aaKnown RBP eCLIP5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 HBZP02008 142 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 RAG2P55895 527 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 MRGPRGQ86SM5 289 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 OR2V2Q96R30 315 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 IGHV1OR15-9A0A0B4J2B8 117 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 HMX2A2RU54 273 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 GAGE10A6NGK3 116 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 CD81P60033 236 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 ADRA2AP08913 450 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 MMP9P14780 707 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 LSM6P62312 80 aaKnown RBP5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 COL10A1Q03692 680 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 KLF9Q13886 244 aaPredicted RBP5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 TNFRSF12AQ9NP84 129 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 SOX21Q9Y651 276 aaPredicted RBP5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 OR8G5Q8NG78 346 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 EXOGQ9Y2C4 368 aaKnown RBP5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 DAOP14920 347 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 TMEFF2Q9UIK5 374 aaPredicted RBP5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 COL16A1Q07092 1604 aaPredicted RBP5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 SCN8AQ9UQD0 1980 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 TRAV8-7A0A075B6U6 113 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 PSG2P11465 335 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 B4GALNT1Q00973 533 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 TP53I13Q8NBR0 393 aaPredicted RBP5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 ZBTB34Q8NCN2 500 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 A0A1B0GTH9 108 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 NPFFO15130 113 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 IGHV4-34P06331 123 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 SLC25A53Q5H9E4 307 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 ZNF714Q96N38 554 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 PIMREGQ9BSJ6 248 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 ANKRD20A5PA0PJZ0 165 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 PGFP49763 221 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 FAM106AQ4KMX7 169 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 OR4C13Q8NGP0 309 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 DUX5Q96PT3 197 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 WNT16Q9UBV4 365 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 NUBPLQ8TB37 319 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 AURKAIP1Q9NWT8 199 aaPredicted RBP5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 LAMB4A4D0S4 1761 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 TMEM50BP56557 158 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 CTF1Q16619 201 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 OR4B1Q8NGF8 309 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 C2orf88Q9BSF0 95 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 MAP1LC3AQ9H492 121 aa5.07□□□□□ -1.6
SRGAP1-201ENST00000355086 ZNF658BQ4V348 819 aaPredicted RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 SIGIRRQ6IA17 410 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 HYAL3O43820 417 aaPredicted RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 MYEOVQ96EZ4 313 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 SCNM1Q9BWG6 230 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 SUMO2P61956 95 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 NSUN5P2Q63ZY6 315 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 SLC16A13Q7RTY0 426 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 ADAP1O75689 374 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 CELA2BP08218 269 aaPredicted RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 C2orf83Q53S99 150 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 MRPL30Q8TCC3 161 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 SCN9AQ15858 1988 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 CTSVO60911 334 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 IGSF11Q5DX21 431 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 OR2Y1Q8NGV0 311 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 RAX2Q96IS3 184 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 FOXC2Q99958 501 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 OR10AC1Q8NH08 325 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 RCC2Q9P258 522 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 MED12Q93074 2177 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 CLDN14O95500 239 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 RAE1P78406 368 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 THSD4Q6ZMP0 1018 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 GALNT14Q96FL9 552 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 DPH3P1Q9H4G8 78 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 CDC42EP3Q9UKI2 254 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 KRTCAP3Q53RY4 240 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 EPHA8P29322 1005 aaPredicted RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 INO80CQ6PI98 192 aaPredicted RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 LSM10Q969L4 123 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 MYOM1P52179 1685 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 PF4P02776 101 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 MDP1Q86V88 176 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 BEND2Q8NDZ0 799 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 ADAMTS17Q8TE56 1095 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 BEX4Q9NWD9 120 aaPredicted RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 PGLYRP4Q96LB8 373 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 SF3B5Q9BWJ5 86 aaKnown RBP5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 C9orf50Q5SZB4 431 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 TMEM101Q96IK0 257 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 CTXND1A0A1B0GTU2 59 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 STAG3L3P0CL85 134 aa5.06□□□□□ -1.6
SRGAP1-201ENST00000355086 HCP5Q6MZN7 132 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms