RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 TCP10Q12799 353 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 STX5Q13190 355 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM241Q24JQ0 296 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM249Q2WGJ8 235 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TCEAL5Q5H9L2 206 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TPGS1Q6ZTW0 290 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 BBS7Q8IWZ6 715 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 HS3ST5Q8IZT8 346 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 ENKURQ8TC29 256 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 FAM45AQ8TCE6 357 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TCEAL3Q969E4 200 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 RNF157Q96PX1 679 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 APOL4Q9BPW4 351 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM208Q9BTX3 173 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 THTPAQ9BU02 230 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 C1orf50Q9BV19 199 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TOLLIPQ9H0E2 274 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 OR51E2Q9H255 320 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 USE1Q9NZ43 259 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 CFL2Q9Y281 166 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 CACNG2Q9Y698 323 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 MTCH2Q9Y6C9 303 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 SVILO95425 2214 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 STAB1Q9NY15 2570 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 IGHV3-64DA0A0J9YX35 117 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 LAD1O00515 517 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 NOS1APO75052 506 aaPredicted RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 NQO1P15559 274 aaKnown RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 CRISP2P16562 243 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 EVI2BP34910 448 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 RCVRNP35243 200 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TALDO1P37837 337 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 RAB25P57735 213 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 RAB8AP61006 207 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 LYZP61626 148 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 MEF2CQ06413 473 aaPredicted RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 BAXQ07812 192 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 MLLT11Q13015 90 aaPredicted RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 ERCC8Q13216 396 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 PNOCQ13519 176 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 PPP1R1AQ13522 171 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 CDNFQ49AH0 187 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 RBM48Q5RL73 367 aaKnown RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TSPO2Q5TGU0 170 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TRIQKQ629K1 86 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 RTL4Q6ZR62 310 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 DCXRQ7Z4W1 244 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 TMEM251Q8N6I4 163 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 OR5W2Q8NH69 310 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 GRPEL2Q8TAA5 225 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 C15orf40Q8WUR7 153 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 DCAKDQ8WVC6 231 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 ESR2Q92731 530 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 DCPSQ96C86 337 aaKnown RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 PPCDCQ96CD2 204 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 MAGEB18Q96M61 343 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 KIFC1Q9BW19 673 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 ZNF223Q9UK11 482 aaPredicted RBP1.09□□□□□ -2.23
BRCA1-202ENST00000354071 V9GYQ6 96 aa1.09□□□□□ -2.23
BRCA1-202ENST00000354071 ATRQ13535 2644 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 VWA8A3KMH1 1905 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 VPS8Q8N3P4 1428 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 POLR3AO14802 1390 aaPredicted RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 IBTKQ9P2D0 1353 aaPredicted RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 TRAV19A0A0A6YYK7 116 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 OR5H1A6NKK0 313 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 CEACAM18A8MTB9 384 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 C2orf74A8MZ97 194 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 TRIM49D1C9J1S8 452 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 H0YJW9 148 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 TGOLN2O43493 480 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 KCNK2O95069 426 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 MMP7P09237 267 aaPredicted RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 CXCL3P19876 107 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 IDH2P48735 452 aaKnown RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 ARPP19P56211 112 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 S100A12P80511 92 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 CAV1Q03135 178 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 QPRTQ15274 297 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SLC25A35Q3KQZ1 300 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 MPV17L2Q567V2 206 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 MESTQ5EB52 335 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SDHAF4Q5VUM1 108 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SPATA31B1PQ5VZV4 182 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 IGFL2Q6UWQ7 119 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 Q6ZSR6 202 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 AKAP14Q86UN6 197 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 CLVS1Q8IUQ0 354 aaPredicted RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 C15orf56Q8N910 161 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 OR4K17Q8NGC6 315 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 OR51D1Q8NGF3 324 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 OR5L1Q8NGL2 311 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 FAM172AQ8WUF8 416 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SKA2Q8WVK7 121 aaPredicted RBP1.09□□□□□ -2.24
BRCA1-202ENST00000354071 PDXPQ96GD0 296 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 SMIM8Q96KF7 97 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 CCDC115Q96NT0 180 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 AP1S3Q96PC3 154 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 BCL2L14Q9BZR8 327 aa1.09□□□□□ -2.24
BRCA1-202ENST00000354071 C6orf62Q9GZU0 229 aaPredicted RBP1.09□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms