RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ZNF845Q96IR2 970 aaPredicted RBP15.96■□□□□ 0.15
SCARF1-202ENST00000348987 LPAR2Q9HBW0 351 aa15.96■□□□□ 0.15
SCARF1-202ENST00000348987 CLEC18AA5D8T8 446 aa15.96■□□□□ 0.14
SCARF1-202ENST00000348987 MAP1LC3B2A6NCE7 125 aa15.96■□□□□ 0.14
SCARF1-202ENST00000348987 TDRG1Q3Y452 100 aa15.96■□□□□ 0.14
SCARF1-202ENST00000348987 CENPVQ7Z7K6 275 aaPredicted RBP15.96■□□□□ 0.14
SCARF1-202ENST00000348987 FADS6Q8N9I5 356 aa15.96■□□□□ 0.14
SCARF1-202ENST00000348987 CLEC18CQ8NCF0 446 aa15.96■□□□□ 0.14
SCARF1-202ENST00000348987 MAP1LC3BQ9GZQ8 125 aa15.96■□□□□ 0.14
SCARF1-202ENST00000348987 OR51I2Q9H344 312 aa15.96■□□□□ 0.14
SCARF1-202ENST00000348987 ZNF442Q9H7R0 627 aa15.96■□□□□ 0.14
SCARF1-202ENST00000348987 KBTBD11O94819 623 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 BRS3P32247 399 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 MDH2P40926 338 aaKnown RBP15.95■□□□□ 0.14
SCARF1-202ENST00000348987 ENDOGQ14249 297 aaKnown RBP15.95■□□□□ 0.14
SCARF1-202ENST00000348987 TESK1Q15569 626 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 CALHM1Q8IU99 346 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 ZNF295-AS1Q8N0V1 137 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 MS4A10Q96PG2 267 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 PLK3Q9H4B4 646 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 PATE3B3GLJ2 98 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 M0R135 149 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 OSR2Q8N2R0 312 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 MAFAQ8NHW3 353 aaPredicted RBP15.95■□□□□ 0.14
SCARF1-202ENST00000348987 ZNF799Q96GE5 643 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 AGMATQ9BSE5 352 aa15.95■□□□□ 0.14
SCARF1-202ENST00000348987 HMGB3O15347 200 aaKnown RBP15.94■□□□□ 0.14
SCARF1-202ENST00000348987 IFNA1P01562 189 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 GNG10P50151 68 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 MEF2BQ02080 365 aaPredicted RBP15.94■□□□□ 0.14
SCARF1-202ENST00000348987 IZUMO4Q1ZYL8 232 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 CST9LP1Q5W188 147 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 GJC3Q8NFK1 279 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 GPR179Q6PRD1 2367 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 A0A0G2JRQ6 117 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 CCL3P10147 92 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 GUCA1AP43080 201 aaPredicted RBP15.94■□□□□ 0.14
SCARF1-202ENST00000348987 ZNF92Q03936 586 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 OR5T1Q8NG75 326 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 RBM24Q9BX46 236 aaKnown RBP15.94■□□□□ 0.14
SCARF1-202ENST00000348987 NCOR1O75376 2440 aa15.94■□□□□ 0.14
SCARF1-202ENST00000348987 EPHA8P29322 1005 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-202ENST00000348987 ARL16Q0P5N6 197 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 LYSMD4Q5XG99 296 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 MRPL14Q6P1L8 145 aaKnown RBP15.93■□□□□ 0.14
SCARF1-202ENST00000348987 CISD2Q8N5K1 135 aaKnown RBP15.93■□□□□ 0.14
SCARF1-202ENST00000348987 LHX4Q969G2 390 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 IL22RA2Q969J5 263 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 NABP1Q96AH0 204 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 BORCS8Q96FH0 119 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 CDX2Q99626 313 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-202ENST00000348987 PARLQ9H300 379 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 RIMS4Q9H426 269 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-202ENST00000348987 IGKV1D-13A0A0B4J2D9 117 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 LCATP04180 440 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 IGKV1-13P0DP09 117 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 MSR1P21757 451 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 MALLQ13021 153 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 TRA2AQ13595 282 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCARF1-202ENST00000348987 OR5I1Q13606 314 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 PCOLCEQ15113 449 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 HLA-BQ31612 363 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 WDR5BQ86VZ2 330 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 CLDN23Q96B33 292 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 SPSB1Q96BD6 273 aa15.93■□□□□ 0.14
SCARF1-202ENST00000348987 COLQQ9Y215 455 aaPredicted RBP15.93■□□□□ 0.14
SCARF1-202ENST00000348987 LILRA1O75019 489 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 CFIP05156 583 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 UCP1P25874 307 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 TNFSF10P50591 281 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 RAET1LQ5VY80 246 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 PARD6AQ9NPB6 346 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 CCL28Q9NRJ3 127 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 PLEK2Q9NYT0 353 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 PDCD6O75340 191 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 HIST1H3AP68431 136 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 MRPL30Q8TCC3 161 aaKnown RBP15.92■□□□□ 0.14
SCARF1-202ENST00000348987 PROK2Q9HC23 129 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 PLSCR2Q9NRY7 297 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 SLC39A9Q9NUM3 307 aa15.92■□□□□ 0.14
SCARF1-202ENST00000348987 OR7C1O76099 320 aaPredicted RBP15.91■□□□□ 0.14
SCARF1-202ENST00000348987 TCN2P20062 427 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 GCH1P30793 250 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 TFPI2P48307 235 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 TOMM20LQ6UXN7 152 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 ZCCHC14Q8WYQ9 949 aaKnown RBP15.91■□□□□ 0.14
SCARF1-202ENST00000348987 C10orf35Q96D05 121 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 RNF150Q9ULK6 438 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 ARHGAP21Q5T5U3 1957 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 TLX3O43711 291 aaPredicted RBP15.91■□□□□ 0.14
SCARF1-202ENST00000348987 CNOT4O95628 575 aaKnown RBP15.91■□□□□ 0.14
SCARF1-202ENST00000348987 IAPPP10997 89 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 TMEM41BQ5BJD5 291 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 TMEM211Q6ICI0 200 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 GATAD1Q8WUU5 269 aa15.91■□□□□ 0.14
SCARF1-202ENST00000348987 LOC102725191A0A1B0GVB3 256 aa15.9■□□□□ 0.14
SCARF1-202ENST00000348987 TCF21O43680 179 aa15.9■□□□□ 0.14
SCARF1-202ENST00000348987 ZIC3O60481 467 aa15.9■□□□□ 0.14
SCARF1-202ENST00000348987 SCTP09683 121 aa15.9■□□□□ 0.14
SCARF1-202ENST00000348987 Q6ZSR3 168 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms