RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 C12orf77C9JDV5 145 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 OR8U9P0C7N5 309 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 SULT1A2P50226 295 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 KLF3P57682 345 aaPredicted RBP17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 POLR2GP62487 172 aaKnown RBP eCLIP17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 COL10A1Q03692 680 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 CXorf66Q5JRM2 361 aaPredicted RBP17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 GFRALQ6UXV0 394 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 OR2C3Q8N628 320 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 BOLLQ8N9W6 283 aaKnown RBP17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 OR10Z1Q8NGY1 313 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 OR8U1Q8NH10 309 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 PARP12Q9H0J9 701 aaKnown RBP17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 WFDC1Q9HC57 220 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 PPP1R3CQ9UQK1 317 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 MSRB2Q9Y3D2 182 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 SLC25A6P12236 298 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 CFHR2P36980 270 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 NHLH2Q02577 135 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 MST1LQ2TV78 715 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 BPIFCQ8NFQ6 507 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 OR1L1Q8NH94 360 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 SUN5Q8TC36 379 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 KCNS2Q9ULS6 477 aa17.09■□□□□ 0.33
CHRNA3-202ENST00000348639 ZGRF1Q86YA3 2104 aa17.08■□□□□ 0.33
CHRNA3-202ENST00000348639 ZSCAN5BA6NJL1 495 aa17.08■□□□□ 0.33
CHRNA3-202ENST00000348639 FBXO24O75426 580 aa17.08■□□□□ 0.33
CHRNA3-202ENST00000348639 TFF1P04155 84 aa17.08■□□□□ 0.33
CHRNA3-202ENST00000348639 MMP9P14780 707 aa17.08■□□□□ 0.33
CHRNA3-202ENST00000348639 TMEM171Q8WVE6 324 aa17.08■□□□□ 0.33
CHRNA3-202ENST00000348639 TOLLIPQ9H0E2 274 aa17.08■□□□□ 0.33
CHRNA3-202ENST00000348639 MMP26Q9NRE1 261 aa17.08■□□□□ 0.33
CHRNA3-202ENST00000348639 METRNQ9UJH8 293 aa17.08■□□□□ 0.33
CHRNA3-202ENST00000348639 IGLV3-9A0A075B6K5 115 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 A0A0G2JNJ9 132 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 A0A1B0GU03 582 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 SRRM5B3KS81 715 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 FAM87AP0C7U9 286 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 IL2RGP31785 369 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 GABRA2P47869 451 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 EWSR1Q01844 656 aaKnown RBP eCLIP17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 PAX5Q02548 391 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 KRBOX4Q5JUW0 171 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 FAM90A1Q86YD7 464 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 LIN7CQ9NUP9 197 aaKnown RBP17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 Q9UFV3 132 aa17.08■□□□□ 0.32
CHRNA3-202ENST00000348639 CADP27708 2225 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 SSSCA1O60232 199 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 HBZP02008 142 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 PRDX2P32119 198 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 PRR30Q53SZ7 412 aaPredicted RBP17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 PXDC1Q5TGL8 231 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 IL34Q6ZMJ4 242 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 C22orf34Q6ZV56 151 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 DRAM1Q8N682 238 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 CD177Q8N6Q3 437 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 SNRNP40Q96DI7 357 aaKnown RBP17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 GINS3Q9BRX5 216 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 PLEKHF2Q9H8W4 249 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 SEBOXQ9HB31 216 aaPredicted RBP17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 LYRM2Q9NU23 88 aaPredicted RBP17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 PLA2G2EQ9NZK7 142 aa17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 TMA7Q9Y2S6 64 aaKnown RBP17.07■□□□□ 0.32
CHRNA3-202ENST00000348639 A0A0G2JRQ6 117 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 FAM24AA6NFZ4 105 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 PITX3O75364 302 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 MED6O75586 246 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 RPS23P62266 143 aaKnown RBP17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 MRGPRGQ86SM5 289 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 LSM10Q969L4 123 aaKnown RBP17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 GPR146Q96CH1 333 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 LURAP1Q96LR2 239 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 MAGT1Q9H0U3 335 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 B8ZZF3 427 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 ATP6V1G2-DDX39BF2Z307 99 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 IGKV1-39P01597 117 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 IGKV1D-39P04432 117 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 SEC11BP0C7V7 166 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 EGR1P18146 543 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 GLIPR1P48060 266 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 CAV2P51636 162 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 VAMP2P63027 116 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 BLOC1S1P78537 153 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 ZNF645Q8N7E2 425 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 MRGPRDQ8TDS7 321 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 MEGF10Q96KG7 1140 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 OR2V2Q96R30 315 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 SLC25A31Q9H0C2 315 aa17.06■□□□□ 0.32
CHRNA3-202ENST00000348639 LPAR6P43657 344 aa17.05■□□□□ 0.32
CHRNA3-202ENST00000348639 ZBTB34Q8NCN2 500 aa17.05■□□□□ 0.32
CHRNA3-202ENST00000348639 IGSF23A1L1A6 192 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 RNF212BA8MTL3 300 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 ZNF737O75373 536 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 PJVKQ0ZLH3 352 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 ZNF585BQ52M93 769 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 FAM209AQ5JX71 171 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 TMEM252Q8N6L7 170 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 OR52L2PQ8NGH6 319 aa17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 NARS2Q96I59 477 aaKnown RBP17.04■□□□□ 0.32
CHRNA3-202ENST00000348639 HRH4Q9H3N8 390 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms