RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 CDIPTO14735 213 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 MT-ND6P03923 174 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 FAM87AP0C7U9 286 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 VSIG10L2P0DP72 767 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 GCSHP23434 173 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 VN1R4Q7Z5H5 301 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 ATOH7Q8N100 152 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 HMGCLL1Q8TB92 370 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 TNFRSF19Q9NS68 423 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 MPZL1O95297 269 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 CALHM3Q86XJ0 350 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 OR1N2Q8NGR9 330 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 TSPAN32Q96QS1 320 aa9.74□□□□□ -0.85
SMARCE1-202ENST00000348513 SCN1AP35498 2009 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 H0YL77 283 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 SOX8P57073 446 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 Q8WTZ3 238 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 C5orf30Q96GV9 206 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 SNHG12Q9BXW3 62 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 OOEPA6NGQ2 149 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 OR4C46A6NHA9 309 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 GAPDHP04406 335 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 CBLN3Q6UW01 205 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 ZNF788Q6ZQV5 615 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 TMEM144Q7Z5S9 345 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 CCL17Q92583 94 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 GALMQ96C23 342 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 CHRNA10Q9GZZ6 450 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 SIGLEC7Q9Y286 467 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 H3BP45 60 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 PLPP2O43688 288 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 CST7O76096 145 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 IGHV3-13P01766 116 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 IGHV3-7P01780 117 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 ZXDAP98168 799 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 EIF3IQ13347 325 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 ZNF664Q8N3J9 261 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 COX11Q9Y6N1 276 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 PAPPAQ13219 1627 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 TRGV10A0A0A0MS01 117 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 EML2O95834 649 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 ERHP84090 104 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 RREB1Q92766 1687 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 LOC107984156A0A0G2JMH3 177 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 SPAARA0A1B0GVQ0 90 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 PPIHO43447 177 aaKnown RBP9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 NDUFB3O43676 98 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 CD160O95971 181 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 PRR35P0CG20 571 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 KIAA0040Q15053 153 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 ARL17AQ8IVW1 177 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 MSRB3Q8IXL7 192 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 COX14Q96I36 57 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 CES1P1Q9UKY3 287 aa9.73□□□□□ -0.85
SMARCE1-202ENST00000348513 BCL2P10415 239 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 CSN1S1P47710 185 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 LRRC10Q5BKY1 277 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 WDR38Q5JTN6 314 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 RNFT1Q5M7Z0 435 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 HARBI1Q96MB7 349 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 THYN1Q9P016 225 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 CXorf51AA0A1B0GTR3 108 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 TNFSF14O43557 240 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 RAMP3O60896 148 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 CTAG2O75638 210 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 ZNF32P17041 273 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 OR5D13Q8NGL4 314 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 BARX1Q9HBU1 254 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 F5P12259 2224 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 NTN1O95631 604 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 RFESDQ8TAC1 157 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 TMEM230Q96A57 120 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 GCM2O75603 506 aaPredicted RBP9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 ZNF562Q6V9R5 426 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 HEPN1Q6WQI6 88 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 RARRES2Q99969 163 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 MCM3APO60318 1980 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 ATG2BQ96BY7 2078 aa9.72□□□□□ -0.85
SMARCE1-202ENST00000348513 A0A0G2JMM0 328 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 A0A1W2PPB8 328 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 GAGE12BA1L429 117 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 KIR3DP1A8MWS1 328 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 CORTO00230 105 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 DYNLT3P51808 116 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 RNPS1Q15287 305 aaKnown RBP9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 PTPRZ1P23471 2315 aaPredicted RBP9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 TMEM272A0A1B0GTI8 110 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 HSPB2A8KAH6 182 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 C11orf94C9JXX5 98 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 CDKN2AP42771 156 aaKnown RBP9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 FOXL2P58012 376 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 ZP1P60852 638 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 P2RY6Q15077 328 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 HSPB2Q16082 182 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 GMPPAQ96IJ6 420 aaPredicted RBP9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 PLSCR2Q9NRY7 297 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 ZNF257Q9Y2Q1 563 aa9.71□□□□□ -0.85
SMARCE1-202ENST00000348513 IGHV3-43A0A0B4J1X8 118 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 A0A1W2PRD5 423 aa9.71□□□□□ -0.86
SMARCE1-202ENST00000348513 A0A1W2PRF3 423 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms