RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 NGFRP08138 427 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 TFPI2P48307 235 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 LYZL2Q7Z4W2 148 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 OR2V2Q96R30 315 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 TMEM204Q9BSN7 226 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 FOXS1O43638 330 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 RPL29P47914 159 aaKnown RBP20.1■□□□□ 0.81
NPAS3-201ENST00000346562 TMEM251Q8N6I4 163 aa20.1■□□□□ 0.81
NPAS3-201ENST00000346562 TRAV39A0A0B4J263 110 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 MMP16P51512 607 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 FAM27BQ5VT28 67 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 SP7Q8TDD2 431 aaPredicted RBP20.09■□□□□ 0.81
NPAS3-201ENST00000346562 RCC2Q9P258 522 aaKnown RBP20.09■□□□□ 0.81
NPAS3-201ENST00000346562 HSD17B13Q7Z5P4 300 aaPredicted RBP20.09■□□□□ 0.81
NPAS3-201ENST00000346562 ZAR1Q86SH2 424 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 ZNF738Q8NE65 137 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 OR5AU1Q8NGC0 362 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 OR1K1Q8NGR3 316 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 RAB24Q969Q5 203 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 CISD1Q9NZ45 108 aaKnown RBP20.09■□□□□ 0.81
NPAS3-201ENST00000346562 A0A1W2PQF6 199 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 MAS1LP35410 378 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 MUC15Q8N387 334 aa20.09■□□□□ 0.81
NPAS3-201ENST00000346562 FAM74A7A6NL05 159 aa20.08■□□□□ 0.81
NPAS3-201ENST00000346562 LRRC75AQ8NAA5 344 aa20.08■□□□□ 0.81
NPAS3-201ENST00000346562 ADAD2Q8NCV1 583 aaKnown RBP20.08■□□□□ 0.81
NPAS3-201ENST00000346562 RAX2Q96IS3 184 aa20.08■□□□□ 0.81
NPAS3-201ENST00000346562 NDUFA2O43678 99 aa20.08■□□□□ 0.81
NPAS3-201ENST00000346562 CTSSP25774 331 aa20.08■□□□□ 0.81
NPAS3-201ENST00000346562 NSUN5P2Q63ZY6 315 aa20.08■□□□□ 0.81
NPAS3-201ENST00000346562 TAF1P21675 1872 aa20.08■□□□□ 0.81
NPAS3-201ENST00000346562 AP4M1O00189 453 aa20.08■□□□□ 0.81
NPAS3-201ENST00000346562 CHODLQ9H9P2 273 aa20.08■□□□□ 0.81
NPAS3-201ENST00000346562 CEACAM18A8MTB9 384 aa20.08■□□□□ 0.8
NPAS3-201ENST00000346562 H3BVH4 76 aa20.08■□□□□ 0.8
NPAS3-201ENST00000346562 UPK3AO75631 287 aa20.08■□□□□ 0.8
NPAS3-201ENST00000346562 GFRA1P56159 465 aa20.08■□□□□ 0.8
NPAS3-201ENST00000346562 LGALSLQ3ZCW2 172 aaPredicted RBP20.08■□□□□ 0.8
NPAS3-201ENST00000346562 PRO1933Q9H354 126 aa20.08■□□□□ 0.8
NPAS3-201ENST00000346562 MRPS18BQ9Y676 258 aaKnown RBP20.08■□□□□ 0.8
NPAS3-201ENST00000346562 MRPL30Q8TCC3 161 aaKnown RBP20.07■□□□□ 0.8
NPAS3-201ENST00000346562 ADAT3Q96EY9 351 aaPredicted RBP20.07■□□□□ 0.8
NPAS3-201ENST00000346562 A0A0U1RQV5 110 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 DDB2Q92466 427 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 PTX4Q96A99 478 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 IFT22Q9H7X7 185 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 ZFP30Q9Y2G7 519 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 LEUTXA8MZ59 168 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 IER3P46695 156 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 ZNF488Q96MN9 340 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 IL19Q9UHD0 177 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 ZNF645Q8N7E2 425 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 SOSTQ9BQB4 213 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 RAB33BQ9H082 229 aa20.07■□□□□ 0.8
NPAS3-201ENST00000346562 A0A0J9YW62 118 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 ZNF137PP52743 207 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 PSG4Q00888 419 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 DLL1O00548 723 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 LBHQ53QV2 105 aaPredicted RBP20.06■□□□□ 0.8
NPAS3-201ENST00000346562 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.06■□□□□ 0.8
NPAS3-201ENST00000346562 BPIFA4PQ86YQ2 179 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 WDFY1Q8IWB7 410 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 WNT2BQ93097 391 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 NPVFQ9HCQ7 196 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 RAB9AP51151 201 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 PACRGQ96M98 296 aaPredicted RBP20.06■□□□□ 0.8
NPAS3-201ENST00000346562 PITPNC1Q9UKF7 332 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 FAM181BA6NEQ2 426 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 SNURFLB1AK76 121 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 FCGR3AP08637 254 aa20.06■□□□□ 0.8
NPAS3-201ENST00000346562 OR4C46A6NHA9 309 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 ZNF324O75467 553 aaPredicted RBP20.05■□□□□ 0.8
NPAS3-201ENST00000346562 FAM53AQ6NSI3 398 aaPredicted RBP20.05■□□□□ 0.8
NPAS3-201ENST00000346562 SNX22Q96L94 193 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 COLQQ9Y215 455 aaPredicted RBP20.05■□□□□ 0.8
NPAS3-201ENST00000346562 HBZP02008 142 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 MGAT2Q10469 447 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 UNQ5815/PRO19632Q6UWF5 114 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 NUBP1P53384 320 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 PCSK4Q6UW60 755 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 NTN1O95631 604 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 FGF12P61328 243 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 ADIPOQQ15848 244 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 FAM106AQ4KMX7 169 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 RAB37Q96AX2 223 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 CDC42EP3Q9UKI2 254 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 DTX4Q9Y2E6 619 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 HOXA6P31267 233 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 MEOX2P50222 304 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 C11orf91Q3C1V1 193 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 MIOXQ9UGB7 285 aa20.05■□□□□ 0.8
NPAS3-201ENST00000346562 ITLN1Q8WWA0 313 aa20.04■□□□□ 0.8
NPAS3-201ENST00000346562 FUT9Q9Y231 359 aa20.04■□□□□ 0.8
NPAS3-201ENST00000346562 TRAV8-7A0A075B6U6 113 aa20.04■□□□□ 0.8
NPAS3-201ENST00000346562 FHL5Q5TD97 284 aa20.04■□□□□ 0.8
NPAS3-201ENST00000346562 STPG2Q8N412 459 aa20.04■□□□□ 0.8
NPAS3-201ENST00000346562 TMEM56-RWDD3S4R434 201 aa20.04■□□□□ 0.8
NPAS3-201ENST00000346562 MYO9BQ13459 2157 aa20.04■□□□□ 0.8
NPAS3-201ENST00000346562 MMD2Q8IY49 270 aa20.04■□□□□ 0.8
NPAS3-201ENST00000346562 MOB4Q9Y3A3 225 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms