RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 C11orf94C9JXX5 98 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 IGHV3-13P01766 116 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 IGHV3-7P01780 117 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 MMP7P09237 267 aaPredicted RBP13.37□□□□□ -0.27
PTPRU-201ENST00000345512 CCL11P51671 97 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 ATP6V1FQ16864 119 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 OR5D13Q8NGL4 314 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 DTD1Q8TEA8 209 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 RHOVQ96L33 236 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 TRIB1Q96RU8 372 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 TUBA4BQ9H853 241 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 DNAJC13O75165 2243 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 PATE3B3GLJ2 98 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 DEFB108BQ8NET1 73 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 POM121Q96HA1 1249 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 ZNF106Q9H2Y7 1883 aaKnown RBP13.37□□□□□ -0.27
PTPRU-201ENST00000345512 SMOC1Q9H4F8 434 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 RPRMQ9NS64 109 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 RPH3ALQ9UNE2 315 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 KIAA1671Q9BY89 1806 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 OR7C2O60412 319 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 TRGC1P0CF51 173 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 G0S2P27469 103 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 PKIAP61925 76 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 C16orf82Q7Z2V1 217 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 MS4A10Q96PG2 267 aa13.37□□□□□ -0.27
PTPRU-201ENST00000345512 SMIM21Q3B7S5 101 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 WDR25Q64LD2 544 aaPredicted RBP13.36□□□□□ -0.27
PTPRU-201ENST00000345512 MUCL1Q96DR8 90 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 TXN2Q99757 166 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 CLN8Q9UBY8 286 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 FZR1Q9UM11 496 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 SYNGR3O43761 229 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 LYZL6O75951 148 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 SRP19P09132 144 aaKnown RBP13.36□□□□□ -0.27
PTPRU-201ENST00000345512 TIGITQ495A1 244 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 CT55Q8WUE5 264 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 OR4C12Q96R67 309 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 TAAR9Q96RI9 348 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 COA4Q9NYJ1 87 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 CXorf65A6NEN9 183 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 GDF9O60383 454 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 GLIPR1P48060 266 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 RIPPLY2Q5TAB7 128 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 TOMM20LQ6UXN7 152 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 DMRT1Q9Y5R6 373 aa13.36□□□□□ -0.27
PTPRU-201ENST00000345512 MST1LQ2TV78 715 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 ZNF718Q3SXZ3 478 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 LRRK1Q38SD2 2015 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FANCMQ8IYD8 2048 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 TRGV5A0A0B4J1U4 118 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 SHISA7A6NL88 538 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 NDUFA2O43678 99 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 ZIC3O60481 467 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 CRYAAP02489 173 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 CCL20P78556 96 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 MEF2BQ02080 365 aaPredicted RBP13.35□□□□□ -0.27
PTPRU-201ENST00000345512 C22orf15Q8WYQ4 148 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 DNASE2BQ8WZ79 361 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 BORCS7Q96B45 105 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 CTXND1A0A1B0GTU2 59 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 hCG_38984A0A1B0GV85 526 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A10PA6NDY2 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A18PA6NE21 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A16PA6NEW6 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A20PA6NIJ5 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A8PA6NJQ4 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A7PA6NKC0 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A22PA8MWA6 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A12PA8MX19 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A5PA8MXJ8 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A23PA8MXZ1 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A15PP0C7V4 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A13PP0C7W8 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A14PP0C7W9 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 FAM90A24PP0C7X0 464 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 NTF3P20783 257 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 TNFSF4P23510 183 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 RPL29P47914 159 aaKnown RBP13.35□□□□□ -0.27
PTPRU-201ENST00000345512 MANBALQ9NQG1 85 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 NCOR1O75376 2440 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 IGLV3-12A0A075B6K2 115 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 C9JQL5 133 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 COX6A1P12074 109 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 CSRP1P21291 193 aaKnown RBP13.35□□□□□ -0.27
PTPRU-201ENST00000345512 ERVFC1-1P60608 527 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 TINAGQ9UJW2 476 aa13.35□□□□□ -0.27
PTPRU-201ENST00000345512 C5orf52A6NGY3 159 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 SPINK4O60575 86 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 CTSSP25774 331 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 MEOX1P50221 254 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 HIST1H3AP68431 136 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 ALKBH6Q3KRA9 238 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 SIGLECL1Q8N7X8 197 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 BMPERQ8N8U9 685 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 IL22RA2Q969J5 263 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 TMEM68Q96MH6 324 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 ZNF506Q5JVG8 444 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 FADS6Q8N9I5 356 aa13.34□□□□□ -0.27
PTPRU-201ENST00000345512 UBE2CO00762 179 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms