RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 C9orf139Q6ZV77 190 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 HOGA1Q86XE5 327 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 PRR18Q8N4B5 295 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 LY6G5BQ8NDX9 201 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 C8orf46Q8TAG6 207 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 MRGPRDQ8TDS7 321 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 ZFAND2BQ8WV99 257 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 SNAPC3Q92966 411 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 FAM234AQ9H0X4 552 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 RIMS4Q9H426 269 aaPredicted RBP11.29□□□□□ -0.6
TPM4-202ENST00000344824 ZNF286AQ9HBT8 521 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 Q9N2K0 584 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 ANK2Q01484 3957 aa11.29□□□□□ -0.6
TPM4-202ENST00000344824 TRBV23-1A0A0A0MS06 115 aa11.28□□□□□ -0.6
TPM4-202ENST00000344824 ANKRD20A5PA0PJZ0 165 aa11.28□□□□□ -0.6
TPM4-202ENST00000344824 ODAMA1E959 279 aa11.28□□□□□ -0.6
TPM4-202ENST00000344824 PMP2P02689 132 aa11.28□□□□□ -0.6
TPM4-202ENST00000344824 CD3DP04234 171 aa11.28□□□□□ -0.6
TPM4-202ENST00000344824 P2RX3P56373 397 aa11.28□□□□□ -0.6
TPM4-202ENST00000344824 ARPC4P59998 168 aa11.28□□□□□ -0.6
TPM4-202ENST00000344824 KLF9Q13886 244 aaPredicted RBP11.28□□□□□ -0.6
TPM4-202ENST00000344824 OR13A1Q8NGR1 328 aa11.28□□□□□ -0.6
TPM4-202ENST00000344824 FAM216AQ8WUB2 273 aa11.28□□□□□ -0.6
TPM4-202ENST00000344824 TENM1Q9UKZ4 2725 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 A0A0U1RQK1 487 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 FUOMA2VDF0 154 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 ZNF736B4DX44 427 aaPredicted RBP11.27□□□□□ -0.6
TPM4-202ENST00000344824 HOXA3O43365 443 aaPredicted RBP11.27□□□□□ -0.6
TPM4-202ENST00000344824 GSTT2P0CG29 244 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 PRTN3P24158 256 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 HRH1P35367 487 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 TAS2R19P59542 299 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 AP3S2P59780 193 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 SSBP1Q04837 148 aaKnown RBP11.27□□□□□ -0.6
TPM4-202ENST00000344824 STEAP1BQ6NZ63 245 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 MOB1BQ7L9L4 216 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 PNKDQ8N490 385 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 Q8N7P7 452 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 POC5Q8NA72 575 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 TMEM229BQ8NBD8 167 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 TAS2R8Q9NYW2 309 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 TBC1D24Q9ULP9 559 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 ANAPC10Q9UM13 185 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 FAM96BQ9Y3D0 163 aa11.27□□□□□ -0.6
TPM4-202ENST00000344824 TRBV6-6A0A0A6YYG2 114 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 A0A1W2PPH5 198 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 RNASEK-C17orf49H0YIS7 233 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 M0R1W7 72 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 RAB3DO95716 219 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 SCTP09683 121 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 AKAIN1P0CW23 69 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 CCL3L1P16619 93 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 OR3A3P47888 321 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 BPIFB3P59826 476 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 HLA-DRB3P79483 266 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 ZNF273Q14593 569 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 SLC9A3R2Q15599 337 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 LTC4SQ16873 150 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 ZNF880Q6PDB4 577 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 ZNF782Q6ZMW2 699 aaPredicted RBP11.26□□□□□ -0.61
TPM4-202ENST00000344824 GAPTQ8N292 157 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 OR4D10Q8NGI6 311 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 OR4C16Q8NGL9 310 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 OR5H2Q8NGV7 314 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 TINAGL1Q9GZM7 467 aaPredicted RBP11.26□□□□□ -0.61
TPM4-202ENST00000344824 PALMDQ9NP74 551 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 MCUBQ9NWR8 336 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 KCNIP1Q9NZI2 227 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 ANXA10Q9UJ72 324 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 TRGV10A0A0A0MS01 117 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 TRDCB7Z8K6 153 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 SDCBPO00560 298 aaPredicted RBP11.26□□□□□ -0.61
TPM4-202ENST00000344824 PLA2G10O15496 165 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 FABP7O15540 132 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 LYRM1O43325 122 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 NAT1P18440 290 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 COX7A1P24310 79 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 ERP29P30040 261 aaKnown RBP11.26□□□□□ -0.61
TPM4-202ENST00000344824 SSTR5P35346 364 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 RFX2P48378 723 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 DEFA1P59665 94 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 DEFA3P59666 94 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 RNASE10Q5GAN6 216 aaKnown RBP11.26□□□□□ -0.61
TPM4-202ENST00000344824 C6orf183Q5T699 404 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 NCR3LG1Q68D85 454 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 OR56B4Q8NH76 319 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 IL1F10Q8WWZ1 152 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 C11orf54Q9H0W9 315 aaPredicted RBP11.26□□□□□ -0.61
TPM4-202ENST00000344824 METTL8Q9H825 291 aaKnown RBP11.26□□□□□ -0.61
TPM4-202ENST00000344824 TAF9BQ9HBM6 251 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 HRASLSQ9HDD0 168 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 EHFQ9NZC4 300 aa11.26□□□□□ -0.61
TPM4-202ENST00000344824 hADV38S2A0JD32 116 aa11.25□□□□□ -0.61
TPM4-202ENST00000344824 CENPXA8MT69 81 aa11.25□□□□□ -0.61
TPM4-202ENST00000344824 C12orf77C9JDV5 145 aa11.25□□□□□ -0.61
TPM4-202ENST00000344824 NPFFO15130 113 aa11.25□□□□□ -0.61
TPM4-202ENST00000344824 BET1O15155 118 aa11.25□□□□□ -0.61
TPM4-202ENST00000344824 AMY2AP04746 511 aa11.25□□□□□ -0.61
TPM4-202ENST00000344824 RNASE1P07998 156 aaKnown RBP11.25□□□□□ -0.61
TPM4-202ENST00000344824 FAUP35544 74 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms