RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 CST11Q9H112 138 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 TAF9BQ9HBM6 251 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 OR2S2Q9NQN1 319 aa9.81□□□□□ -0.84
SGCA-202ENST00000344627 RCC2Q9P258 522 aaKnown RBP9.81□□□□□ -0.84
SGCA-202ENST00000344627 FAM90A10PA6NDY2 464 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 FAM90A7PA6NKC0 464 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 FAM90A23PA8MXZ1 464 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 ZNF736B4DX44 427 aaPredicted RBP9.8□□□□□ -0.84
SGCA-202ENST00000344627 CA11O75493 328 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 ATP6V1G2O95670 118 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 MOSP00540 346 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 CD1BP29016 333 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 THBS3P49746 956 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 RPL23AP62750 156 aaKnown RBP9.8□□□□□ -0.84
SGCA-202ENST00000344627 MED22Q15528 200 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 TMEM30BQ3MIR4 351 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 CT45A1Q5HYN5 189 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 C6orf141Q5SZD1 244 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 GLT8D1Q68CQ7 371 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 OR10K2Q6IF99 312 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 SLC25A48Q6ZT89 311 aaKnown RBP9.8□□□□□ -0.84
SGCA-202ENST00000344627 CEACAM19Q7Z692 300 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 IZUMO1Q8IYV9 350 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 C8orf31Q8N9H6 132 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 KLHL30-AS1Q8NEE0 82 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 CT45A3Q8NHU0 189 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 SETD6Q8TBK2 473 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 CHMP1AQ9HD42 196 aaPredicted RBP9.8□□□□□ -0.84
SGCA-202ENST00000344627 GHRLQ9UBU3 117 aa9.8□□□□□ -0.84
SGCA-202ENST00000344627 LINC01548A6NM66 108 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 TXNL1O43396 289 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 IGHG2P01859 326 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 GLAP06280 429 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 UBBP0CG47 229 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 HSMCR30P0CW71 290 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 ZNF134P52741 427 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 RAB25P57735 213 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 EBI3Q14213 229 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 SPHARQ15513 63 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 Q3ZCU0 254 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 HSD17B12Q53GQ0 312 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 SIGIRRQ6IA17 410 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 C18orf65Q6ZTR6 163 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 OR2W3Q7Z3T1 314 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 C5orf24Q7Z6I8 188 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 MRPL41Q8IXM3 137 aaKnown RBP9.79□□□□□ -0.84
SGCA-202ENST00000344627 STPG2Q8N412 459 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 Q8N9W7 124 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 OR52L2PQ8NGH6 319 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 ST6GALNAC6Q969X2 333 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 RBMXL1Q96E39 390 aaKnown RBP9.79□□□□□ -0.84
SGCA-202ENST00000344627 S1PR3Q99500 378 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 FAAP24Q9BTP7 215 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 FKBP14Q9NWM8 211 aa9.79□□□□□ -0.84
SGCA-202ENST00000344627 NKX1-2Q9UD57 310 aaPredicted RBP9.79□□□□□ -0.84
SGCA-202ENST00000344627 AP4M1O00189 453 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 MYF6P23409 242 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 HOXD3P31249 432 aaPredicted RBP9.78□□□□□ -0.84
SGCA-202ENST00000344627 PPP1CCP36873 323 aaKnown RBP9.78□□□□□ -0.84
SGCA-202ENST00000344627 GPR12P47775 334 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 DGCR2P98153 550 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 GNMTQ14749 295 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 PNLIPRP3Q17RR3 467 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 MORN2Q502X0 79 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 LIPKQ5VXJ0 399 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 TEX38Q6PEX7 206 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 ZNF439Q8NDP4 499 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 OR8H1Q8NGG4 311 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 IL1F10Q8WWZ1 152 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 UFD1Q92890 307 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 TMEM203Q969S6 136 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 GALMQ96C23 342 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 CYYR1Q96J86 154 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 CHCHD6Q9BRQ6 235 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 ABHD14AQ9BUJ0 271 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 TMEM59Q9BXS4 323 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 CCDC90BQ9GZT6 254 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 ABCG5Q9H222 651 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 LIN7CQ9NUP9 197 aaKnown RBP9.78□□□□□ -0.84
SGCA-202ENST00000344627 ABRACLQ9P1F3 81 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 TPRKBQ9Y3C4 175 aa9.78□□□□□ -0.84
SGCA-202ENST00000344627 SC5DO75845 299 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 RGS11O94810 467 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 VSIG8P0DPA2 414 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 SRMP19623 302 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 SOX6P35712 828 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 F2RL1P55085 397 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 AQP4P55087 323 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 KRTAP10-11P60412 298 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 CXorf66Q5JRM2 361 aaPredicted RBP9.77□□□□□ -0.85
SGCA-202ENST00000344627 RNLSQ5VYX0 342 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 LCNL1Q6ZST4 164 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 C6orf201Q7Z4U5 140 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 LRRTM1Q86UE6 522 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 LYPD6Q86Y78 171 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 GAPTQ8N292 157 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 Q8N6K4 173 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 KCNG3Q8TAE7 436 aa9.77□□□□□ -0.85
SGCA-202ENST00000344627 MRPL30Q8TCC3 161 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms