RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 NDUFB4O95168 129 aa11.99□□□□□ -0.49
TRIO-202ENST00000344204 NTN1O95631 604 aa11.99□□□□□ -0.49
TRIO-202ENST00000344204 FNDC1Q4ZHG4 1894 aaPredicted RBP11.99□□□□□ -0.49
TRIO-202ENST00000344204 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.99□□□□□ -0.49
TRIO-202ENST00000344204 A1L4Q6 167 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 QTRT1Q9BXR0 403 aaKnown RBP11.98□□□□□ -0.49
TRIO-202ENST00000344204 TBX6O95947 436 aaPredicted RBP11.98□□□□□ -0.49
TRIO-202ENST00000344204 OR2V2Q96R30 315 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 C5orf66Q9H5L9 145 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 PEX11BO96011 259 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 TMEM108Q6UXF1 575 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 OR11L1Q8NGX0 322 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 ZNF391Q9UJN7 358 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 TCFL5Q9UL49 500 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 CTSVO60911 334 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 SELEP16581 610 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 SLC35E4Q6ICL7 350 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 CADM4Q8NFZ8 388 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 OR10AG1Q8NH19 301 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.98□□□□□ -0.49
TRIO-202ENST00000344204 TOX2Q96NM4 488 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 HIST1H4GQ99525 98 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 RBKSQ9H477 322 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 ERRFI1Q9UJM3 462 aaPredicted RBP11.98□□□□□ -0.49
TRIO-202ENST00000344204 RPS11P62280 158 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRIO-202ENST00000344204 PMS2P1A4D2B8 440 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 VENTXO95231 258 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 CALHM1Q8IU99 346 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 MRGPRDQ8TDS7 321 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 MRPL58Q14197 206 aaKnown RBP11.98□□□□□ -0.49
TRIO-202ENST00000344204 TPTE2P1Q5T6R2 138 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 TMEM70Q9BUB7 260 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 CRYM-AS1A6NIL9 109 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 LEPROTL1O95214 131 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 AMBPP02760 352 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 ZPBPQ9BS86 351 aa11.98□□□□□ -0.49
TRIO-202ENST00000344204 TRAV39A0A0B4J263 110 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 GDF9O60383 454 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 TNFSF13O75888 250 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 FSTP19883 344 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 SF3B6Q9Y3B4 125 aaKnown RBP11.97□□□□□ -0.49
TRIO-202ENST00000344204 IGLV3-16A0A075B6K0 115 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 HYAL3O43820 417 aaPredicted RBP11.97□□□□□ -0.49
TRIO-202ENST00000344204 WISP3O95389 354 aaPredicted RBP11.97□□□□□ -0.49
TRIO-202ENST00000344204 ZNF708P17019 499 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 PYY3Q5JQD4 70 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 DEFB118Q96PH6 123 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 B4GALNT1Q00973 533 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 C1orf61Q13536 156 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 C2orf68Q2NKX9 166 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 OR10V1Q8NGI7 309 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 TMEM56Q96MV1 263 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 GDE1Q9NZC3 331 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 BOKQ9UMX3 212 aaPredicted RBP11.97□□□□□ -0.49
TRIO-202ENST00000344204 TMEM30CPA0ZSE6 113 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 KLF7O75840 302 aaPredicted RBP11.97□□□□□ -0.49
TRIO-202ENST00000344204 FAM157CP0CG43 387 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 DPTQ07507 201 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 GAPTQ8N292 157 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 OR1K1Q8NGR3 316 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 A0A1W2PR80 420 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 PPYP01298 95 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 OR1L4Q8NGR5 311 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 OR1F12Q8NHA8 337 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 GRPP07492 148 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 TBC1D28Q2M2D7 210 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 TMEM164Q5U3C3 297 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 LRRC75AQ8NAA5 344 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 OR10W1Q8NGF6 305 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 AP5S1Q9NUS5 200 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 TDGF1P3P51864 188 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 GPR27Q9NS67 375 aa11.97□□□□□ -0.49
TRIO-202ENST00000344204 ZFP36L2P47974 494 aaKnown RBP11.96□□□□□ -0.49
TRIO-202ENST00000344204 GBGT1Q8N5D6 347 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 OR2M3Q8NG83 312 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 SLC7A10Q9NS82 523 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 OCIAD1Q9NX40 245 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 NTSR1P30989 418 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 SSR4P51571 173 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 RRADP55042 308 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 SPINK9Q5DT21 86 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 C1orf194Q5T5A4 169 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 DOLPP1Q86YN1 238 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 OR10X1Q8NGY0 326 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 SOX21Q9Y651 276 aaPredicted RBP11.96□□□□□ -0.49
TRIO-202ENST00000344204 LSM6P62312 80 aaKnown RBP11.96□□□□□ -0.49
TRIO-202ENST00000344204 UMODP07911 640 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 SSMEM1Q8WWF3 244 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 ASB5Q8WWX0 329 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 LHX9Q9NQ69 397 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 EMP1P54849 157 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 Q8IYB0 196 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 INSL6Q9Y581 213 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 GDF1P27539 372 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 TMEM106BQ9NUM4 274 aa11.96□□□□□ -0.49
TRIO-202ENST00000344204 NANOS3P60323 173 aaKnown RBP11.96□□□□□ -0.5
TRIO-202ENST00000344204 MENTQ9BUN1 341 aa11.96□□□□□ -0.5
TRIO-202ENST00000344204 A8MWP6 167 aa11.96□□□□□ -0.5
TRIO-202ENST00000344204 EPPINO95925 133 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms