RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 ZNF837Q96EG3 531 aaPredicted RBP8.25□□□□□ -1.09
HOXA1-201ENST00000343060 YPEL2Q96QA6 119 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 IGFLR1Q9H665 355 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 PSENENQ9NZ42 101 aa8.25□□□□□ -1.09
HOXA1-201ENST00000343060 CTXND1A0A1B0GTU2 59 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 LINC01565O15544 149 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 ZFAND5O76080 213 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 MMP7P09237 267 aaPredicted RBP8.24□□□□□ -1.09
HOXA1-201ENST00000343060 OR3A1P47881 315 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 OR1D5P58170 312 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 PRSS8Q16651 343 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 DEFB133Q30KQ1 61 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 CYB5R2Q6BCY4 276 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 KCNIP4Q6PIL6 250 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 SPSB4Q96A44 273 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 SPACA9Q96E40 222 aaPredicted RBP8.24□□□□□ -1.09
HOXA1-201ENST00000343060 OR4C12Q96R67 309 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 SLC39A9Q9NUM3 307 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 TOX3O15405 576 aaPredicted RBP8.24□□□□□ -1.09
HOXA1-201ENST00000343060 IGKV1-39P01597 117 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 IGKV1D-39P04432 117 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 IL3RAP26951 378 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 S100GP29377 79 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 PRSS12P56730 875 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 FGF12P61328 243 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 FAM69BQ5VUD6 431 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF324BQ6AW86 544 aaPredicted RBP8.24□□□□□ -1.09
HOXA1-201ENST00000343060 TEX43Q6ZNM6 134 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 FGF21Q9NSA1 209 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 TMEM38BQ9NVV0 291 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 CACNG5Q9UF02 275 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 CHCHD2Q9Y6H1 151 aaPredicted RBP8.24□□□□□ -1.09
HOXA1-201ENST00000343060 PXMP4Q9Y6I8 212 aa8.24□□□□□ -1.09
HOXA1-201ENST00000343060 TNRC6BQ9UPQ9 1833 aaKnown RBP8.23□□□□□ -1.09
HOXA1-201ENST00000343060 LRP5LA4QPB2 252 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 IFNL4K9M1U5 179 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 TNFSF11O14788 317 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 DUX1O43812 170 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 SOX15O60248 233 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 SCGB1D1O95968 90 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 EPHA8P29322 1005 aaPredicted RBP8.23□□□□□ -1.09
HOXA1-201ENST00000343060 HNRNPKP61978 463 aaKnown RBP eCLIP8.23□□□□□ -1.09
HOXA1-201ENST00000343060 MRPS11P82912 194 aaKnown RBP8.23□□□□□ -1.09
HOXA1-201ENST00000343060 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.23□□□□□ -1.09
HOXA1-201ENST00000343060 C7orf61Q8IZ16 206 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 ZCCHC14Q8WYQ9 949 aaKnown RBP8.23□□□□□ -1.09
HOXA1-201ENST00000343060 UCN2Q96RP3 112 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 RASL10BQ96S79 203 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 CDH23Q9H251 3354 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 SPAG17Q6Q759 2223 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 NPIPB11E5RHQ5 1161 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 TNFSF12O43508 249 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 LILRA1O75019 489 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 TNFSF13O75888 250 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 HPRT1P00492 218 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 SERPINE2P07093 398 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 NPSP0C0P6 89 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 IAPPP10997 89 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 PSG2P11465 335 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 ZNF32P17041 273 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 ACSM6Q6P461 480 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 TMEM14EPQ6UXP3 125 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 RABEPKQ7Z6M1 372 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 OR10J5Q8NHC4 309 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 NEIL1Q96FI4 390 aaPredicted RBP8.23□□□□□ -1.09
HOXA1-201ENST00000343060 WDYHV1Q96HA8 205 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 GPR35Q9HC97 309 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 OR2W1Q9Y3N9 320 aa8.23□□□□□ -1.09
HOXA1-201ENST00000343060 MED12Q93074 2177 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 IGHV3-15A0A0B4J1V0 119 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 FAM90A26D6RGX4 464 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 TMPRSS2O15393 492 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 IGKV1-5P01602 117 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 ESDP10768 282 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 BCL3P20749 454 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 SLC38A11Q08AI6 406 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 PIGCQ92535 297 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 MS4A10Q96PG2 267 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 MIEN1Q9BRT3 115 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 WNT5BQ9H1J7 359 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 RIMS4Q9H426 269 aaPredicted RBP8.22□□□□□ -1.09
HOXA1-201ENST00000343060 CD207Q9UJ71 328 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 UBE2L5PA0A1B0GUS4 154 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 CD300LBA8K4G0 201 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 EDN3P14138 238 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 CD38P28907 300 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 PPP1CBP62140 327 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 IZUMO4Q1ZYL8 232 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 TMEM256Q8N2U0 113 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 CPT1CQ8TCG5 803 aa8.22□□□□□ -1.09
HOXA1-201ENST00000343060 SF3B5Q9BWJ5 86 aaKnown RBP8.22□□□□□ -1.09
HOXA1-201ENST00000343060 FGF23Q9GZV9 251 aaPredicted RBP8.22□□□□□ -1.09
HOXA1-201ENST00000343060 IL6RP08887 468 aaPredicted RBP8.21□□□□□ -1.1
HOXA1-201ENST00000343060 IRF2P14316 349 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 BRS3P32247 399 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 RPL29P47914 159 aaKnown RBP8.21□□□□□ -1.1
HOXA1-201ENST00000343060 SELENOTP62341 195 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 PSG4Q00888 419 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 FOXL1Q12952 345 aa8.21□□□□□ -1.1
HOXA1-201ENST00000343060 CLEC12BQ2HXU8 276 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms