RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 MYO5AQ9Y4I1 1855 aaKnown RBP13.01□□□□□ -0.33
UBE3B-202ENST00000342494 LOC101059948A0A1B0GTJ6 334 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 A0A1W2PS18 150 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 RHBDL1O75783 438 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 RNF212Q495C1 297 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 CLLU1Q5K131 121 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 GUCD1Q96NT3 240 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 LPAR5Q9H1C0 372 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 PARD6AQ9NPB6 346 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 NAT8Q9UHE5 227 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 ZNF107Q9UII5 783 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-202ENST00000342494 SHANK3Q9BYB0 1731 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 RGPD4Q7Z3J3 1758 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 LEUTXA8MZ59 168 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 MELTFP08582 738 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 BSXQ3C1V8 233 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 SEZ6L2Q6UXD5 910 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 OR10G8Q8NGN5 311 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 EAF1Q96JC9 268 aaPredicted RBP13.01□□□□□ -0.33
UBE3B-202ENST00000342494 MIOXQ9UGB7 285 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 A1L4Q6 167 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 PTP4A3O75365 173 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 GTF2H5Q6ZYL4 71 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 PHYHIPLQ96FC7 376 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 SNX22Q96L94 193 aa13.01□□□□□ -0.33
UBE3B-202ENST00000342494 PGA4P0DJD7 388 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 HERVK_113P61574 105 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 MRPL37Q9BZE1 423 aaKnown RBP13□□□□□ -0.33
UBE3B-202ENST00000342494 SVILO95425 2214 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 HYPMO75409 117 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 CRHP06850 196 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 TMEM50BP56557 158 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 FGF12P61328 243 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 SPANXN1Q5VSR9 72 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 OR8G5Q8NG78 346 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 RCC2Q9P258 522 aaKnown RBP13□□□□□ -0.33
UBE3B-202ENST00000342494 SCN3AQ9NY46 2000 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 PPIAL4CA0A0B4J2A2 164 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 SS18L1O75177 396 aaPredicted RBP13□□□□□ -0.33
UBE3B-202ENST00000342494 PPIAL4GP0DN37 164 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 LY6EQ16553 131 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 IL19Q9UHD0 177 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 OR2H2O95918 312 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 TM4SF20Q53R12 229 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 METTL26Q96S19 204 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 MARVELD1Q9BSK0 173 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 AP5S1Q9NUS5 200 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 TMSB15BA0A087X1C1 80 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 FAM210BQ96KR6 192 aa13□□□□□ -0.33
UBE3B-202ENST00000342494 CDRT15L2A8MXV6 281 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 PRSS23O95084 383 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 CYB5R3P00387 301 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-202ENST00000342494 CD1BP29016 333 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 ARF6P62330 175 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 SLC35E3Q7Z769 313 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 HOGA1Q86XE5 327 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 IGHV3OR16-12A0A075B7B8 117 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 EWSR1Q01844 656 aaKnown RBP eCLIP12.99□□□□□ -0.33
UBE3B-202ENST00000342494 C16orf92Q96LL3 132 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 KLHDC2Q9Y2U9 406 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 RD3LP0DJH9 198 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 ERGP11308 486 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 CRISP2P16562 243 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 Q6ZN92 141 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 C10orf111Q8N326 155 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 FDCSPQ8NFU4 85 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 ABHD14BQ96IU4 210 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 HELTA6NFD8 242 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 DHRS7CA6NNS2 312 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 SLC25A53Q5H9E4 307 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 LAMTOR1Q6IAA8 161 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 OR4C12Q96R67 309 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 SIRT7Q9NRC8 400 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 FOXD3Q9UJU5 478 aaPredicted RBP12.99□□□□□ -0.33
UBE3B-202ENST00000342494 UNC13CQ8NB66 2214 aa12.99□□□□□ -0.33
UBE3B-202ENST00000342494 CXorf1O96002 111 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 FCGR3AP08637 254 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 CEACAM1P13688 526 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 ERVS71-1P61550 626 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 PCOLCEQ15113 449 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 OR10J6PQ8NGY7 276 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 LINC01560Q8TB33 94 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 DCTN5Q9BTE1 182 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 RP1P56715 2156 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 LOC105371242A0A075B767 164 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 HMSDA8MTL9 139 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 SYNGR3O43761 229 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 MMD2Q8IY49 270 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 MUC15Q8N387 334 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 GPA33Q99795 319 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 EIF4EBP2Q13542 120 aaPredicted RBP12.98□□□□□ -0.33
UBE3B-202ENST00000342494 SLC35E4Q6ICL7 350 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 SEC16AO15027 2179 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 SRSF10O75494 262 aaKnown RBP12.98□□□□□ -0.33
UBE3B-202ENST00000342494 ZNF735P0CB33 412 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 SMAGPQ0VAQ4 97 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 SCGB1D4Q6XE38 83 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 DDB2Q92466 427 aa12.98□□□□□ -0.33
UBE3B-202ENST00000342494 PAGE4O60829 102 aa12.97□□□□□ -0.33
UBE3B-202ENST00000342494 PNRC1Q12796 327 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms