RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 RNF223E7ERA6 249 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 S100A4P26447 101 aaKnown RBP10.93□□□□□ -0.66
LIN54-201ENST00000340417 SSX1Q16384 188 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 FAM122CQ6P4D5 195 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 ACP7Q6ZNF0 438 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 DEDD2Q8WXF8 326 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 ZNF436Q9C0F3 470 aaPredicted RBP10.93□□□□□ -0.66
LIN54-201ENST00000340417 IGKV1D-43A0A0B4J1Z2 117 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 SSX3Q99909 188 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 HDHD3Q9BSH5 251 aaPredicted RBP10.93□□□□□ -0.66
LIN54-201ENST00000340417 DPM3Q9P2X0 92 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 MBP02144 154 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 C1QTNF5Q9BXJ0 243 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 DOK5Q9P104 306 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 ST6GALNAC2Q9UJ37 374 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 MYO7BQ6PIF6 2116 aa10.93□□□□□ -0.66
LIN54-201ENST00000340417 OR5AC1P0C628 307 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 ZNF154Q13106 437 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 TMEM30BQ3MIR4 351 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 FAM122BQ7Z309 247 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 OR5M8Q8NGP6 311 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 SLC25A28Q96A46 364 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 TMEM186Q96B77 213 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 MDC1Q14676 2089 aaKnown RBP10.92□□□□□ -0.66
LIN54-201ENST00000340417 ISG15P05161 165 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 IL24Q13007 206 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 SEZ6L2Q6UXD5 910 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 OR1B1Q8NGR6 318 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 OR1L1Q8NH94 360 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 IGHV3-21A0A0B4J1V1 117 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 SMIM18P0DKX4 95 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 WT1P19544 449 aaPredicted RBP10.92□□□□□ -0.66
LIN54-201ENST00000340417 ID1P41134 155 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 TMEM182Q6ZP80 229 aaPredicted RBP10.92□□□□□ -0.66
LIN54-201ENST00000340417 ZDHHC22Q8N966 263 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 FRZBQ92765 325 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 GNPNAT1Q96EK6 184 aaPredicted RBP10.92□□□□□ -0.66
LIN54-201ENST00000340417 PGLYRP3Q96LB9 341 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 SLC25A15Q9Y619 301 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 ADAM10O14672 748 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 CLN5O75503 358 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 CRYGSP22914 178 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 OR5I1Q13606 314 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 NCMAPQ5T1S8 102 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 SFT2D1Q8WV19 159 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 AQP3Q92482 292 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 MTFP1Q9UDX5 166 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 TRAV40A0A0B4J280 105 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 LMX1BO60663 402 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 TFPI2P48307 235 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 FCN2Q15485 313 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 LAMTOR1Q6IAA8 161 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 KDF1Q8NAX2 398 aaPredicted RBP10.92□□□□□ -0.66
LIN54-201ENST00000340417 PLEKHA2Q9HB19 425 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 OR51B2Q9Y5P1 312 aa10.92□□□□□ -0.66
LIN54-201ENST00000340417 G6PCP35575 357 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM106AQ4KMX7 169 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 LINC00052Q96N35 136 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 TUBA4BQ9H853 241 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 RPL12P30050 165 aaKnown RBP10.91□□□□□ -0.66
LIN54-201ENST00000340417 VDAC2P45880 294 aaPredicted RBP10.91□□□□□ -0.66
LIN54-201ENST00000340417 OR1L6Q8NGR2 347 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 UQCC1Q9NVA1 299 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 TMA7Q9Y2S6 64 aaKnown RBP10.91□□□□□ -0.66
LIN54-201ENST00000340417 ICE1Q9Y2F5 2266 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A10PA6NDY2 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A18PA6NE21 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A16PA6NEW6 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A20PA6NIJ5 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A8PA6NJQ4 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A7PA6NKC0 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A22PA8MWA6 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A12PA8MX19 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A5PA8MXJ8 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A23PA8MXZ1 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 B3GALNT1O75752 331 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 C1QL1O75973 258 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A15PP0C7V4 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A13PP0C7W8 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A14PP0C7W9 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 FAM90A24PP0C7X0 464 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 PSMB6P28072 239 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 TIGITQ495A1 244 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 RTN4RL2Q86UN3 420 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 THY1P04216 161 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 PPOXP50336 477 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 ZNF474Q6S9Z5 364 aaPredicted RBP10.91□□□□□ -0.66
LIN54-201ENST00000340417 MMD2Q8IY49 270 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 BSCL2Q96G97 398 aaPredicted RBP10.91□□□□□ -0.66
LIN54-201ENST00000340417 NRIP2Q9BQI9 281 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 LSM2Q9Y333 95 aaKnown RBP10.91□□□□□ -0.66
LIN54-201ENST00000340417 ANAPC1Q9H1A4 1944 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 hCG_38984A0A1B0GV85 526 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 J3QR06 171 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 CLPSP04118 112 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 ATP5G2Q06055 141 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 Q71RC1 249 aaPredicted RBP10.91□□□□□ -0.66
LIN54-201ENST00000340417 C3orf56Q8N813 242 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 C15orf54Q8N8G6 183 aa10.91□□□□□ -0.66
LIN54-201ENST00000340417 RBPMSQ93062 196 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms