RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 SPDEFO95238 335 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 IFNA7P01567 189 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 ACOT7LQ6ZUV0 252 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 FAM90A1Q86YD7 464 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 KCNRGQ8N5I3 272 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 ANGPTL6Q8NI99 470 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 RNASE6Q93091 150 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 KCNS2Q9ULS6 477 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 IGHV3-43A0A0B4J1X8 118 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 IGHV3-43DP0DP04 118 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 CA5BP1Q8WTZ4 195 aa18.73■□□□□ 0.59
PDLIM2-203ENST00000339162 A0A0D9SG52 128 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 OR2F2O95006 317 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 OR2F1Q13607 317 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 LTC4SQ16873 150 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 ALKAL2Q6UX46 152 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 BVESQ8NE79 360 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 OR1S1Q8NH92 325 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 ARL11Q969Q4 196 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 NDRG3Q9UGV2 375 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 UBQLN2Q9UHD9 624 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 RNF150Q9ULK6 438 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 DSCAMO60469 2012 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 MSGN1A6NI15 193 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 PRSS54Q6PEW0 395 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 OR52M1Q8NGK5 317 aa18.72■□□□□ 0.59
PDLIM2-203ENST00000339162 DYSFO75923 2080 aa18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 ANKHD1Q8IWZ3 2542 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 SFTPCP11686 197 aa18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 PPP1CCP36873 323 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 EDDM3BP56851 147 aa18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 ZNF345Q14585 488 aa18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 FBXL19-AS1Q494R0 122 aa18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 ZNF695Q8IW36 515 aa18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 GALNT11Q8NCW6 608 aa18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 LILRB1Q8NHL6 650 aaPredicted RBP18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 SNX22Q96L94 193 aa18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 LSM5Q9Y4Y9 91 aaKnown RBP18.71■□□□□ 0.59
PDLIM2-203ENST00000339162 P2RX3P56373 397 aa18.7■□□□□ 0.58
PDLIM2-203ENST00000339162 DEFB108AA8MXU0 73 aa18.7■□□□□ 0.58
PDLIM2-203ENST00000339162 K7N7A8 449 aa18.7■□□□□ 0.58
PDLIM2-203ENST00000339162 GYPAP02724 150 aa18.7■□□□□ 0.58
PDLIM2-203ENST00000339162 CD3EP07766 207 aa18.7■□□□□ 0.58
PDLIM2-203ENST00000339162 F2RP25116 425 aa18.7■□□□□ 0.58
PDLIM2-203ENST00000339162 SELENOHQ8IZQ5 122 aaKnown RBP18.7■□□□□ 0.58
PDLIM2-203ENST00000339162 OR2S2Q9NQN1 319 aa18.7■□□□□ 0.58
PDLIM2-203ENST00000339162 KANTRA0A1W2PQU2 76 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 ODAMA1E959 279 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 MGST3O14880 152 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 SIAH2O43255 324 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 IRF2P14316 349 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 FAM222BQ8WU58 562 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 TMEM56Q96MV1 263 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 CNTNAP3BQ96NU0 1288 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 CCL13Q99616 98 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 CNTNAP3Q9BZ76 1288 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 TMEM56-RWDD3S4R434 201 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 CDS2O95674 445 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 TNFRSF1AP19438 455 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 Q8TCH9 128 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 SAP30LQ9HAJ7 183 aa18.69■□□□□ 0.58
PDLIM2-203ENST00000339162 VSTM5A8MXK1 200 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 MBPP02686 304 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 ZNF16P17020 682 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 UCP1P25874 307 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 SLC51BQ86UW2 128 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 PPP1R35Q8TAP8 253 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 NINJ1Q92982 152 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 LURAP1Q96LR2 239 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 CITED4Q96RK1 184 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 TMED3Q9Y3Q3 217 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 H0Y980 276 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 C15orf65H3BRN8 121 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 BCL2L11O43521 198 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 LYL1P12980 280 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 S100GP29377 79 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 STUMQ69YW2 141 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 DRAM1Q8N682 238 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 FAM216BQ8N7L0 139 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 ERGIC1Q969X5 290 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 ZNF471Q9BX82 626 aaPredicted RBP18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 DYNLRB1Q9NP97 96 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 KCNJ16Q9NPI9 418 aa18.68■□□□□ 0.58
PDLIM2-203ENST00000339162 LRBAP50851 2863 aa18.67■□□□□ 0.58
PDLIM2-203ENST00000339162 TUBAL3A6NHL2 446 aa18.67■□□□□ 0.58
PDLIM2-203ENST00000339162 RLN2P04090 185 aa18.67■□□□□ 0.58
PDLIM2-203ENST00000339162 PET100P0DJ07 73 aa18.67■□□□□ 0.58
PDLIM2-203ENST00000339162 OMGP23515 440 aa18.67■□□□□ 0.58
PDLIM2-203ENST00000339162 FGFRL1Q8N441 504 aa18.67■□□□□ 0.58
PDLIM2-203ENST00000339162 CCL17Q92583 94 aa18.67■□□□□ 0.58
PDLIM2-203ENST00000339162 DIRC2Q96SL1 478 aa18.67■□□□□ 0.58
PDLIM2-203ENST00000339162 OR2D2Q9H210 308 aa18.67■□□□□ 0.58
PDLIM2-203ENST00000339162 RPS10-NUDT3A0A1W2PQS6 291 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 CD55P08174 381 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 ADH4P08319 380 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 SRPXP78539 464 aa18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 ZNF808Q8N4W9 903 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 CISD1Q9NZ45 108 aaKnown RBP18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 RAI1Q7Z5J4 1906 aaPredicted RBP18.66■□□□□ 0.58
PDLIM2-203ENST00000339162 F5H0A9 414 aaPredicted RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms