RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 Q6Q795 121 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 SAXO1Q8IYX7 474 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 TMEM252Q8N6L7 170 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 RNF208Q9H0X6 261 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 MUC21A0A0G2JKD1 596 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 MUC21A0A140T8X8 626 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 MBLAC1A4D2B0 266 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 CA1P00915 261 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 IGLV3-25P01717 112 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 G6PCP35575 357 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 EFNB2P52799 333 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 NRN1LQ496H8 165 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 MUC21Q5SSG8 566 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF684Q5T5D7 378 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 OR5C1Q8NGR4 320 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 TMEM255BQ8WV15 326 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 TMEM59Q9BXS4 323 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ATG10Q9H0Y0 220 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ERRFI1Q9UJM3 462 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 FAM181BA6NEQ2 426 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 CRYM-AS1A6NIL9 109 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF850A8MQ14 1090 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 DUSP11O75319 330 aaKnown RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 CTSBP07858 339 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 RHOCP08134 193 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 SLC25A6P12236 298 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 CDKN1AP38936 164 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ASIPP42127 132 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ZP4Q12836 540 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ACSM6Q6P461 480 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 LSRQ86X29 649 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 PIANPQ8IYJ0 282 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 OR2AJ1Q8NGZ0 328 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 CHCHD1Q96BP2 118 aaKnown RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 DAZAP1Q96EP5 407 aaKnown RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 GPX7Q96SL4 187 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 IL21Q9HBE4 155 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 A1L4Q6 167 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 FAM24AA6NFZ4 105 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 CFIP05156 583 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 IFI6P09912 130 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ZGLP1P0C6A0 271 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ALOX5APP20292 161 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 MRPL23Q16540 153 aaKnown RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 SPRYD7Q5W111 196 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ADAMTSL5Q6ZMM2 481 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 GCSAMQ8N6F7 178 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 PLPP7Q8NBV4 271 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 OXGR1Q96P68 337 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 MAP1LC3CQ9BXW4 147 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 MED20Q9H944 212 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 LIN7CQ9NUP9 197 aaKnown RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 CLDND1Q9NY35 253 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 KLRF1Q9NZS2 232 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 CES1P1Q9UKY3 287 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 BCORQ6W2J9 1755 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 H0YJW9 148 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 KLK1P06870 262 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 SP9P0CG40 484 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 KIR2DL1P43626 348 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 PITX1P78337 314 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 GAGE2BQ13066 116 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 GAGE2EQ4V326 116 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 TRAT1Q6PIZ9 186 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 HFE2Q6ZVN8 426 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 METTL27Q8N6F8 245 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 FAM169BQ8N8A8 192 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 VSTM2LQ96N03 204 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 PLA2G2EQ9NZK7 142 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 GAGE2DQ9UEU5 116 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 SMIM9A6NGZ8 99 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 SNURFLB1AK76 121 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 NRG2O14511 850 aaPredicted RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 RUNX3Q13761 415 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 HES1Q14469 280 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 C1orf140Q5VVS0 124 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ZADH2Q8N4Q0 377 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 ZNF645Q8N7E2 425 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 OR51H1Q8NH63 302 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 KLHDC7BQ96G42 594 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 NMNAT3Q96T66 252 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 VN1R1Q9GZP7 353 aa3.58□□□□□ -1.84
NEDD4-201ENST00000338963 PNRC2Q9NPJ4 139 aaKnown RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 DDX60LQ5H9U9 1706 aaKnown RBP3.58□□□□□ -1.84
NEDD4-201ENST00000338963 NDUFS4O43181 175 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 HCRTO43612 131 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SNCGO76070 127 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 CGAP01215 116 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 APCSP02743 223 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 OR1Q1Q15612 314 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 Q56UQ5 140 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SAMD5Q5TGI4 173 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SP5Q6BEB4 398 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-201ENST00000338963 OR4F17Q8NGA8 305 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 OR4A5Q8NH83 315 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 NRGNQ92686 78 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 RAB37Q96AX2 223 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 SPON2Q9BUD6 331 aa3.57□□□□□ -1.84
NEDD4-201ENST00000338963 IGLV3-10A0A075B6K4 115 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms