RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 FAHD2BQ6P2I3 314 aaPredicted RBP7.07□□□□□ -1.28
HPS4-201ENST00000336873 UQCC3Q6UW78 93 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 CARFQ8N187 725 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 TMEM252Q8N6L7 170 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 NANOS1Q8WY41 292 aaKnown RBP7.07□□□□□ -1.28
HPS4-201ENST00000336873 NTNG2Q96CW9 530 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 FAHD2AQ96GK7 314 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 FAM173AQ9BQD7 235 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 OSGIN2Q9Y236 505 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 DMXL2Q8TDJ6 3036 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 A0A1W2PNV4 684 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 CBY3A6NI87 242 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 PRF1P14222 555 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 GNG3P63215 75 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 TLE4Q04727 773 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 SSPNQ14714 243 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 C17orf82Q86X59 251 aaPredicted RBP7.07□□□□□ -1.28
HPS4-201ENST00000336873 ZNF573Q86YE8 665 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 POC1AQ8NBT0 407 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 OR10D4PQ8NGN7 298 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 KCNE4Q8WWG9 221 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 PTX4Q96A99 478 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 IMMP1LQ96LU5 166 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 PNRC2Q9NPJ4 139 aaKnown RBP7.07□□□□□ -1.28
HPS4-201ENST00000336873 SERTAD4Q9NUC0 356 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 MTCH1Q9NZJ7 389 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 ZNF391Q9UJN7 358 aa7.07□□□□□ -1.28
HPS4-201ENST00000336873 MALRD1Q5VYJ5 2156 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 NUDT19A8MXV4 375 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 MT-CO3P00414 261 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 FABP4P15090 132 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 NDUFB7P17568 137 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 CHRNA7P36544 502 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 MECP2P51608 486 aaKnown RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 PDLIM3Q53GG5 364 aaPredicted RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 SNIP1Q8TAD8 396 aaKnown RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 OR5B12Q96R08 314 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 SMIM7Q9BQ49 75 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 CRIM1Q9NZV1 1036 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 A0A0U1RQV5 110 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 M0R1B8 84 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 FCGR3BO75015 233 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 IGHV3-48P01763 117 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 RELQ04864 619 aaPredicted RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 Q0VFX4 171 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 OR8B8Q15620 311 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 ZNF766Q5HY98 468 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 H2BFWTQ7Z2G1 175 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 OR52L2PQ8NGH6 319 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 SLC25A40Q8TBP6 338 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 CABLES2Q9BTV7 478 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 SLC35B3Q9H1N7 401 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 CRYM-AS1A6NIL9 109 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 TOX3O15405 576 aaPredicted RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 IFI6P09912 130 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 ZNF25P17030 456 aaPredicted RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 BTF3P20290 206 aaKnown RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 FKBP2P26885 142 aaKnown RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 RSPO1Q2MKA7 263 aaPredicted RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 ZNF561Q8N587 486 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 PATZ1Q9HBE1 687 aaKnown RBP7.06□□□□□ -1.28
HPS4-201ENST00000336873 WFDC1Q9HC57 220 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 TMED3Q9Y3Q3 217 aa7.06□□□□□ -1.28
HPS4-201ENST00000336873 ANKHD1Q8IWZ3 2542 aaKnown RBP7.05□□□□□ -1.28
HPS4-201ENST00000336873 RBFOX3A6NFN3 312 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 SYNGR3O43761 229 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 SRSF10O75494 262 aaKnown RBP7.05□□□□□ -1.28
HPS4-201ENST00000336873 TOX4O94842 621 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 IGHMP01871 453 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 CD55P08174 381 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 ACAA1P09110 424 aaPredicted RBP7.05□□□□□ -1.28
HPS4-201ENST00000336873 DLK1P80370 383 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 PRAMEF5Q5TYX0 476 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 H1FXQ92522 213 aaKnown RBP7.05□□□□□ -1.28
HPS4-201ENST00000336873 PINX1Q96BK5 328 aaKnown RBP7.05□□□□□ -1.28
HPS4-201ENST00000336873 SNX22Q96L94 193 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 TAAR9Q96RI9 348 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 LAMP3Q9UQV4 416 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 TP53TG5Q9Y2B4 290 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 LTBP2Q14767 1821 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 A0A087X0M5 115 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 A0A1B0GX30 115 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 LOC390937A0A1W2PQ73 354 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 PRSS47A8MTI9 375 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 H3BQ15 152 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 PHOX2AO14813 284 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 IL2RAP01589 272 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 CST2P09228 141 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 FGF5P12034 268 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 QRFPP83859 136 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 IL34Q6ZMJ4 242 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 TGIF2LXQ8IUE1 241 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 ADAMTS17Q8TE56 1095 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 SSMEM1Q8WWF3 244 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 FER1L6-AS2Q96M78 137 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 GUCD1Q96NT3 240 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 SEC11CQ9BY50 192 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 FAM117AQ9C073 453 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 ENY2Q9NPA8 101 aa7.05□□□□□ -1.28
HPS4-201ENST00000336873 TMEM9BQ9NQ34 198 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms