RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 FAM90A13PP0C7W8 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A14PP0C7W9 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FAM90A24PP0C7X0 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 CEACAM6P40199 344 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 PMELP40967 661 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 FABP6P51161 128 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 SRPXP78539 464 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 OR10V1Q8NGI7 309 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 MSL2Q9HCI7 577 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 MPC1Q9Y5U8 109 aa12.57□□□□□ -0.4
UBA1-201ENST00000335972 SMPD2O60906 423 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 ID3Q02535 119 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 TESK1Q15569 626 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 PRAMEF6Q5VXH4 476 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 VWA1Q6PCB0 445 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 HIST1H2BAQ96A08 127 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 J3QT63 122 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 IGHV3-13P01766 116 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 IGHV3-7P01780 117 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 WT1P19544 449 aaPredicted RBP12.56□□□□□ -0.4
UBA1-201ENST00000335972 FGF8P55075 233 aaPredicted RBP12.56□□□□□ -0.4
UBA1-201ENST00000335972 PSG7Q13046 419 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 HABP2Q14520 560 aaPredicted RBP12.56□□□□□ -0.4
UBA1-201ENST00000335972 SPINK9Q5DT21 86 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 ADAM5Q6NVV9 412 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 H1FOOQ8IZA3 346 aaPredicted RBP12.56□□□□□ -0.4
UBA1-201ENST00000335972 ZNF295-AS1Q8N0V1 137 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 FDCSPQ8NFU4 85 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 OR1L1Q8NH94 360 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 RFESDQ8TAC1 157 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 VSIRQ9H7M9 311 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 DMXL2Q8TDJ6 3036 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 IGHV3-43A0A0B4J1X8 118 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 OR5B21A6NL26 309 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 PSPNO60542 156 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 IGLV2-14P01704 120 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 IGHV3-43DP0DP04 118 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 PLA2G2CQ5R387 149 aa12.56□□□□□ -0.4
UBA1-201ENST00000335972 DEFB108AA8MXU0 73 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 H0Y980 276 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 PITX3O75364 302 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 AESQ08117 197 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 ARL16Q0P5N6 197 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 IL24Q13007 206 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 BTNL3Q6UXE8 466 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 RTL8AQ9BWD3 113 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 IGKV1-5P01602 117 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 ZNF266Q14584 549 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 SPSB3Q6PJ21 355 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 SLC25A31Q9H0C2 315 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 URGCP-MRPS24S4R325 110 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 NDUFA2O43678 99 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 RND3P61587 244 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 FOXF2Q12947 444 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 TRIP6Q15654 476 aaKnown RBP12.55□□□□□ -0.4
UBA1-201ENST00000335972 SOHLH1Q5JUK2 328 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 SHEQ5VZ18 495 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 DEFB124Q8NES8 71 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 OR52L2PQ8NGH6 319 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 OR5D13Q8NGL4 314 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 DCTN5Q9BTE1 182 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 SLC35B3Q9H1N7 401 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 RNF122Q9H9V4 155 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 GP6Q9HCN6 339 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 TMEM9BQ9NQ34 198 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 RNF115Q9Y4L5 304 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 ATMQ13315 3056 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 CHD3Q12873 2000 aaKnown RBP12.55□□□□□ -0.4
UBA1-201ENST00000335972 AKAP13Q12802 2813 aa12.55□□□□□ -0.4
UBA1-201ENST00000335972 PTPRZ1P23471 2315 aaPredicted RBP12.54□□□□□ -0.4
UBA1-201ENST00000335972 HMGB3O15347 200 aaKnown RBP12.54□□□□□ -0.4
UBA1-201ENST00000335972 ZNF14P17017 642 aaPredicted RBP12.54□□□□□ -0.4
UBA1-201ENST00000335972 OR3A1P47881 315 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 ZNF816Q0VGE8 651 aaPredicted RBP12.54□□□□□ -0.4
UBA1-201ENST00000335972 OR8G1Q15617 311 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 SPANXN5Q5MJ07 72 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 AKR1C8PQ5T2L2 129 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 LCN15Q6UWW0 184 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 NANOS1Q8WY41 292 aaKnown RBP12.54□□□□□ -0.4
UBA1-201ENST00000335972 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 RBMS3Q6XE24 437 aaKnown RBP12.54□□□□□ -0.4
UBA1-201ENST00000335972 Q6ZS49 121 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 C12orf57Q99622 126 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 MMP24Q9Y5R2 645 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 PCNX1Q96RV3 2341 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 KIAA1324LA8MWY0 1029 aaPredicted RBP12.54□□□□□ -0.4
UBA1-201ENST00000335972 RAMP3O60896 148 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 CTXN2P0C2S0 81 aa12.54□□□□□ -0.4
UBA1-201ENST00000335972 STRAPQ9Y3F4 350 aaKnown RBP12.54□□□□□ -0.4
UBA1-201ENST00000335972 RBFOX3A6NFN3 312 aa12.53□□□□□ -0.4
UBA1-201ENST00000335972 KRASP01116 189 aa12.53□□□□□ -0.4
UBA1-201ENST00000335972 SULT1A1P50225 295 aa12.53□□□□□ -0.4
UBA1-201ENST00000335972 ELLP55199 621 aaPredicted RBP12.53□□□□□ -0.4
UBA1-201ENST00000335972 OR8G2PQ6IF36 304 aa12.53□□□□□ -0.4
UBA1-201ENST00000335972 TNFSF10P50591 281 aa12.53□□□□□ -0.4
UBA1-201ENST00000335972 CYB561D1Q8N8Q1 229 aa12.53□□□□□ -0.4
UBA1-201ENST00000335972 MRGPRDQ8TDS7 321 aa12.53□□□□□ -0.4
UBA1-201ENST00000335972 PBDC1Q9BVG4 233 aa12.53□□□□□ -0.4
UBA1-201ENST00000335972 PLK3Q9H4B4 646 aa12.53□□□□□ -0.4
UBA1-201ENST00000335972 BIN3Q9NQY0 253 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms