RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 PRNTQ86SH4 94 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 C4orf45Q96LM5 186 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 PAAF1Q9BRP4 392 aa5.46□□□□□ -1.54
CSMD1-201ENST00000335551 TMIGD3P0DMS9 266 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 OR10AC1Q8NH08 325 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 TRPM3Q9HCF6 1732 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 HELZP42694 1942 aaKnown RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 OR11H12B2RN74 326 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 PRRG2O14669 202 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 CLLU1OSQ5K130 101 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 NFAM1Q8NET5 270 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 OR11H1Q8NG94 326 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 OR2Z1Q8NG97 314 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 OR2K2Q8NGT1 345 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 OR11H2Q8NH07 326 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 MVB12AQ96EY5 273 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 PARLQ9H300 379 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 TMEFF2Q9UIK5 374 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM250H0YL14 139 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 MPLP40238 635 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 TNFSF10P50591 281 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 DPTQ07507 201 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 PTPN13Q12923 2485 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 RALGAPA2Q2PPJ7 1873 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 NRSN2Q9GZP1 204 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 RBKSQ9H477 322 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 DNAJC4Q9NNZ3 241 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 BEX4Q9NWD9 120 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 PGPEP1Q9NXJ5 209 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 TINAGQ9UJW2 476 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 SONP18583 2426 aaKnown RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 GUCA2BQ16661 112 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 SPINK9Q5DT21 86 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 GCSAMLQ5JQS6 135 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 WDR25Q64LD2 544 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 RTN4RL1Q86UN2 441 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 ABHD1Q96SE0 405 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 DSPPQ9NZW4 1301 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 DPRXA6NFQ7 191 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 MYOGP15173 224 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 CAPZBP47756 277 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM50BP56557 158 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 WFDC8Q8IUA0 241 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 OR4C3Q8NH37 302 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 LTB4R2Q9NPC1 389 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM50AO95807 157 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 EWSR1Q01844 656 aaKnown RBP eCLIP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 FAM71F2Q6NXP2 309 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 OR4X1Q8NH49 305 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 SIGLEC7Q9Y286 467 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 UPK1AO00322 258 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 SS18L1O75177 396 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 RNF224P0DH78 156 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 GALNT14Q96FL9 552 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 ANKRD10Q9NXR5 420 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 TRPM7Q96QT4 1865 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 DEFB108AA8MXU0 73 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 GCM2O75603 506 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 ASB16Q96NS5 453 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 DMRTA2Q96SC8 542 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 KIR2DL4Q99706 377 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 ALX4Q9H161 411 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 MMP25Q9NPA2 562 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 SIPA1L3O60292 1781 aaPredicted RBP5.45□□□□□ -1.54
CSMD1-201ENST00000335551 IGLV3-10A0A075B6K4 115 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 PRF1P14222 555 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 ZNF750Q32MQ0 723 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 SPNS2Q8IVW8 549 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM101Q96IK0 257 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 KCNS1Q96KK3 526 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 NCOR1P1Q9H4R4 102 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 HSPB7Q9UBY9 170 aa5.45□□□□□ -1.54
CSMD1-201ENST00000335551 PTP4A3O75365 173 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 SRIP30626 198 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 DSCR4P56555 118 aaPredicted RBP5.44□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM211Q6ICI0 200 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 OLIG3Q7RTU3 272 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 OR4D5Q8NGN0 318 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 PDLIM7Q9NR12 457 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 SBF2Q86WG5 1849 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 IGKV6D-21A0A0A0MT36 114 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 FGF17O60258 216 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 APOMO95445 188 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 RAE1P78406 368 aaKnown RBP5.44□□□□□ -1.54
CSMD1-201ENST00000335551 FAM53BQ14153 422 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM177Q53S58 311 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 OR1L8Q8NGR8 309 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 TSPAN32Q96QS1 320 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 TPSD1Q9BZJ3 242 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 GEMIN7Q9H840 131 aaKnown RBP5.44□□□□□ -1.54
CSMD1-201ENST00000335551 C1RLQ9NZP8 487 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 TUBD1Q9UJT1 453 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 USP54Q70EL1 1684 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 NRXN3Q9Y4C0 1643 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 EPPINO95925 133 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 AGAP20933 346 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 DLX6P56179 175 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 TMEM52BQ4KMG9 183 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 SLC25A30Q5SVS4 291 aa5.44□□□□□ -1.54
CSMD1-201ENST00000335551 PPIL1Q9Y3C6 166 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms