RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 MRGPRFQ96AM1 343 aa17.64■□□□□ 0.41
TPM1-204ENST00000334895 OR2S2Q9NQN1 319 aa17.64■□□□□ 0.41
TPM1-204ENST00000334895 ONECUT1Q9UBC0 465 aa17.64■□□□□ 0.41
TPM1-204ENST00000334895 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.63■□□□□ 0.415e-6■■■□□ 16.3
TPM1-204ENST00000334895 NAP1L6A6NFF2 107 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 TUSC2O75896 110 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 FCGR2CP31995 323 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 PPP1CCP36873 323 aaKnown RBP17.63■□□□□ 0.41
TPM1-204ENST00000334895 CCR6P51684 374 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 DLX1P56177 255 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 DEFA1P59665 94 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 DEFA3P59666 94 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 ARF6P62330 175 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 DHRS11Q6UWP2 260 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 ZNF782Q6ZMW2 699 aaPredicted RBP17.63■□□□□ 0.41
TPM1-204ENST00000334895 CIARTQ8N365 385 aaPredicted RBP17.63■□□□□ 0.41
TPM1-204ENST00000334895 OR10V1Q8NGI7 309 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 OR10J5Q8NHC4 309 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 DMRTB1Q96MA1 342 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 GFOD1Q9NXC2 390 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 ZANQ9Y493 2812 aa17.63■□□□□ 0.41
TPM1-204ENST00000334895 A0A1W2PPH5 198 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 FAM172BPA6NC97 362 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 CENPXA8MT69 81 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 DISC1C4P0D8 188 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 IFNA6P05013 189 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 MSMBP08118 114 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 IGHV1-8P0DP01 117 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 ZBTB25P24278 435 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 CEACAM6P40199 344 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 GLCCI1Q86VQ1 547 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 LHFPL1Q86WI0 220 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 OR10A7Q8NGE5 316 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 OR13C8Q8NGS7 320 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 GIMAP1Q8WWP7 306 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 GINS4Q9BRT9 223 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 ZNF2Q9BSG1 426 aaPredicted RBP17.62■□□□□ 0.41
TPM1-204ENST00000334895 TOLLIPQ9H0E2 274 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 RAB9BQ9NP90 201 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 SLC2A8Q9NY64 477 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 JPT1Q9UK76 154 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 F8P00451 2351 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 ACANP16112 2415 aa17.62■□□□□ 0.41
TPM1-204ENST00000334895 B4DSR2 109 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 HSPA12AO43301 675 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 RBP4P02753 201 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 AADACP22760 399 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 SLC6A1P30531 599 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 TSPAN5P62079 268 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 TMEM249Q2WGJ8 235 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 SCGB2B2Q4G0G5 96 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 AADACL3Q5VUY0 350 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 NRARPQ7Z6K4 114 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 LDLRAD3Q86YD5 345 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 KIR3DL3Q8N743 410 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 OR52M1Q8NGK5 317 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 LEAP2Q969E1 77 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 RDH8Q9NYR8 311 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 GNG12Q9UBI6 72 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 INSIG2Q9Y5U4 225 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 OR5H14A6NHG9 310 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 M0R1W7 72 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 IGHV3-7P01780 117 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 NFYBP25208 207 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 PRB3Q04118 309 aaPredicted RBP17.61■□□□□ 0.41
TPM1-204ENST00000334895 MORN2Q502X0 79 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 PLA1AQ53H76 456 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 IDO2Q6ZQW0 420 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 OR6F1Q8NGZ6 308 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 SIRPDQ9H106 197 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 ZNF69Q9UC07 566 aa17.61■□□□□ 0.41
TPM1-204ENST00000334895 YPEL1O60688 119 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 PPYP01298 95 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 IGHV4-31P0DP07 118 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 DVL1P1P54792 670 aaPredicted RBP17.6■□□□□ 0.41
TPM1-204ENST00000334895 TMEM30BQ3MIR4 351 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 MZT2BQ6NZ67 158 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 LINC01356Q8N9X3 169 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 MSI2Q96DH6 328 aaKnown RBP17.6■□□□□ 0.41
TPM1-204ENST00000334895 YPEL2Q96QA6 119 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 PRRT1Q99946 306 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 SUCNR1Q9BXA5 334 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 FXYD6Q9H0Q3 95 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 SESN1Q9Y6P5 492 aa17.6■□□□□ 0.41
TPM1-204ENST00000334895 HIVEP1P15822 2718 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 IGKV1D-13A0A0B4J2D9 117 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 IGKV1-13P0DP09 117 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 MMP9P14780 707 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 SPNP16150 400 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 ZNF134P52741 427 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 TMEM17Q86X19 198 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 ZNF439Q8NDP4 499 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 TERB2Q8NHR7 220 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 MOB3AQ96BX8 217 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 OCEL1Q9H607 264 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 OR2W1Q9Y3N9 320 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 KPTNQ9Y664 436 aa17.59■□□□□ 0.41
TPM1-204ENST00000334895 A0A087X0M5 115 aa17.58■□□□□ 0.41
TPM1-204ENST00000334895 A0A1B0GX30 115 aa17.58■□□□□ 0.41
TPM1-204ENST00000334895 SLC31A2O15432 143 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms