RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 MEX3AA1L020 520 aaKnown RBP14.15□□□□□ -0.14
DDX41-201ENST00000330503 C17orf100A8MU93 164 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 C15orf65H3BRN8 121 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 PET100P0DJ07 73 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 IL2RGP31785 369 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 UBA52P62987 128 aaKnown RBP14.15□□□□□ -0.14
DDX41-201ENST00000330503 C6orf183Q5T699 404 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 ZNRF1Q8ND25 227 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 OR5D13Q8NGL4 314 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 NEUROG1Q92886 237 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 ERGIC1Q969X5 290 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 AKR1E2Q96JD6 320 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 ARPC5LQ9BPX5 153 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 DCAF16Q9NXF7 216 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 PPP1R3CQ9UQK1 317 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 LSM5Q9Y4Y9 91 aaKnown RBP14.15□□□□□ -0.14
DDX41-201ENST00000330503 AUP1Q9Y679 476 aa14.15□□□□□ -0.14
DDX41-201ENST00000330503 FAM90A27PA6NNH2 459 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 LEUTXA8MZ59 168 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 E7EQL1 145 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 K7EPK0 472 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 K7N7A8 449 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 MGST3O14880 152 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 CD55P08174 381 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 GRNP28799 593 aaKnown RBP14.14□□□□□ -0.15
DDX41-201ENST00000330503 CHRNB4P30926 498 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 SSTR5P35346 364 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 EDDM3AQ14507 147 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 CDSNQ15517 529 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 FAM71E2Q8N5Q1 922 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 OR4D5Q8NGN0 318 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 PLPPR2Q96GM1 343 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 ZNF471Q9BX82 626 aaPredicted RBP14.14□□□□□ -0.15
DDX41-201ENST00000330503 ANKRD34BA5PLL1 514 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 TUBAL3A6NHL2 446 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 SCGB1D2O95969 90 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 HKR1P10072 659 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 RAB14P61106 215 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 CCL8P80075 99 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 DRAM1Q8N682 238 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 OR51H1Q8NH63 302 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 RFESDQ8TAC1 157 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 LINC01560Q8TB33 94 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 RNASE6Q93091 150 aaKnown RBP14.14□□□□□ -0.15
DDX41-201ENST00000330503 ARL11Q969Q4 196 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 DNTTIP1Q9H147 329 aa14.14□□□□□ -0.15
DDX41-201ENST00000330503 ESRP2Q9H6T0 727 aaKnown RBP14.14□□□□□ -0.15
DDX41-201ENST00000330503 DSCAMO60469 2012 aa14.13□□□□□ -0.15
DDX41-201ENST00000330503 ODAMA1E959 279 aa14.13□□□□□ -0.15
DDX41-201ENST00000330503 F5H0A9 414 aaPredicted RBP14.13□□□□□ -0.15
DDX41-201ENST00000330503 S100GP29377 79 aa14.13□□□□□ -0.15
DDX41-201ENST00000330503 NUP62P37198 522 aaPredicted RBP14.13□□□□□ -0.15
DDX41-201ENST00000330503 CR1LQ2VPA4 569 aa14.13□□□□□ -0.15
DDX41-201ENST00000330503 ESCO2Q56NI9 601 aa14.13□□□□□ -0.15
DDX41-201ENST00000330503 STUMQ69YW2 141 aa14.13□□□□□ -0.15
DDX41-201ENST00000330503 DIRC2Q96SL1 478 aa14.13□□□□□ -0.15
DDX41-201ENST00000330503 RNF150Q9ULK6 438 aa14.13□□□□□ -0.15
DDX41-201ENST00000330503 RBM7Q9Y580 266 aaKnown RBP14.13□□□□□ -0.15
DDX41-201ENST00000330503 DYSFO75923 2080 aa14.13□□□□□ -0.15
DDX41-201ENST00000330503 A0A1B0GW55 424 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 NMBP08949 121 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 DUX4L2P0CJ85 424 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 DUX4L3P0CJ86 424 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 DUX4L4P0CJ87 422 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 DUX4L5P0CJ88 424 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 DUX4L6P0CJ89 424 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 DUX4L7P0CJ90 424 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 SELLP14151 372 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 PPP1CCP36873 323 aaKnown RBP14.12□□□□□ -0.15
DDX41-201ENST00000330503 NMSQ5H8A3 153 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 DUX4L9Q6RFH8 374 aaPredicted RBP14.12□□□□□ -0.15
DDX41-201ENST00000330503 DEFB108BQ8NET1 73 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 PPP1R35Q8TAP8 253 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 RBPMSQ93062 196 aaKnown RBP14.12□□□□□ -0.15
DDX41-201ENST00000330503 IL22RA2Q969J5 263 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 SDSLQ96GA7 329 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 C5orf30Q96GV9 206 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 DUX4Q9UBX2 424 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 DUXBA0A1W2PPF3 345 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 CITED4Q96RK1 184 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 KCNS2Q9ULS6 477 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 ROS1P08922 2347 aa14.12□□□□□ -0.15
DDX41-201ENST00000330503 IGHV3-43A0A0B4J1X8 118 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 CLEC18AA5D8T8 446 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 ADAM20O43506 726 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 IGKV1-39P01597 117 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 IGKV1D-39P04432 117 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 IGHV3-43DP0DP04 118 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 GZMHP20718 246 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 TLE1Q04724 770 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 SMCO1Q147U7 214 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 TRAT1Q6PIZ9 186 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 CLEC18CQ8NCF0 446 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 GALNT11Q8NCW6 608 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 OR2S2Q9NQN1 319 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.11□□□□□ -0.15
DDX41-201ENST00000330503 VSTM5A8MXK1 200 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 PLAUP00749 431 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 VDAC1P21796 283 aa14.11□□□□□ -0.15
DDX41-201ENST00000330503 RPL12P30050 165 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms