RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 DEFB109BQ30KR1 87 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 ZNF826PQ6ZT77 177 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 TMEM217Q8N7C4 229 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 LSM10Q969L4 123 aaKnown RBP12.28□□□□□ -0.44
TPM3-206ENST00000330188 AIFM2Q9BRQ8 373 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 ABHD14AQ9BUJ0 271 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 EIF5A2Q9GZV4 153 aaKnown RBP12.28□□□□□ -0.44
TPM3-206ENST00000330188 RBM7Q9Y580 266 aaKnown RBP12.28□□□□□ -0.44
TPM3-206ENST00000330188 FRYQ5TBA9 3013 aa12.28□□□□□ -0.44
TPM3-206ENST00000330188 LOC400499M0QZD8 3231 aa12.27□□□□□ -0.45
TPM3-206ENST00000330188 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.27□□□□□ -0.45
TPM3-206ENST00000330188 IGKV1-5P01602 117 aa12.27□□□□□ -0.45
TPM3-206ENST00000330188 ZNF585BQ52M93 769 aa12.27□□□□□ -0.45
TPM3-206ENST00000330188 FIP1L1Q6UN15 594 aaKnown RBP12.27□□□□□ -0.45
TPM3-206ENST00000330188 CXXC4Q9H2H0 198 aa12.27□□□□□ -0.45
TPM3-206ENST00000330188 PLSCR4Q9NRQ2 329 aa12.27□□□□□ -0.45
TPM3-206ENST00000330188 LIN7CQ9NUP9 197 aaKnown RBP12.27□□□□□ -0.45
TPM3-206ENST00000330188 GTF3C1Q12789 2109 aa12.27□□□□□ -0.45
TPM3-206ENST00000330188 SPENQ96T58 3664 aaKnown RBP12.27□□□□□ -0.45
TPM3-206ENST00000330188 UMAD1C9J7I0 102 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 KITLGP21583 273 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 HOXA4Q00056 320 aaPredicted RBP12.26□□□□□ -0.45
TPM3-206ENST00000330188 IGF2-ASQ6U949 168 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 DRAM1Q8N682 238 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 LFNGQ8NES3 379 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 RNASE11Q8TAA1 199 aaKnown RBP12.26□□□□□ -0.45
TPM3-206ENST00000330188 CACNG5Q9UF02 275 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 CACNA1GO43497 2377 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 A0A1B0GV50 99 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 TMEM30CPA0ZSE6 113 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 TXNL1O43396 289 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 TNFSF13O75888 250 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 KIAA2026Q5HYC2 2103 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 Q6ZR03 302 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 OR10Z1Q8NGY1 313 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 RAB40CQ96S21 281 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 ATP5SQ99766 215 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 PBDC1Q9BVG4 233 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 DKK4Q9UBT3 224 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 FZR1Q9UM11 496 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 OTOGLQ3ZCN5 2332 aa12.26□□□□□ -0.45
TPM3-206ENST00000330188 A0A1B0GW64 132 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 H3BP45 60 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 TIMM8AO60220 97 aaPredicted RBP12.25□□□□□ -0.45
TPM3-206ENST00000330188 IGLV1-44P01699 117 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 CEACAM1P13688 526 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 ZNF16P17020 682 aaPredicted RBP12.25□□□□□ -0.45
TPM3-206ENST00000330188 RPL23AP62750 156 aaKnown RBP12.25□□□□□ -0.45
TPM3-206ENST00000330188 RUNX1Q01196 453 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 PRAMEF6Q5VXH4 476 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 SPSB3Q6PJ21 355 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 ETV3LQ6ZN32 361 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 ACP7Q6ZNF0 438 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 STX12Q86Y82 276 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 ZNF610Q8N9Z0 462 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 OR1L1Q8NH94 360 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 GNPNAT1Q96EK6 184 aaPredicted RBP12.25□□□□□ -0.45
TPM3-206ENST00000330188 TAAR6Q96RI8 345 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 FBXO7Q9Y3I1 522 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 CACNA1HO95180 2353 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 ZFHX4Q86UP3 3567 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 A6NLC8 198 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 AHRRA9YTQ3 701 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 CEACAM4O75871 244 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 TUBG1P23258 451 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 CD200P41217 278 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 OR3A1P47881 315 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 SULT1A1P50225 295 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 TMEM267Q0VDI3 215 aaPredicted RBP12.25□□□□□ -0.45
TPM3-206ENST00000330188 SLC35E4Q6ICL7 350 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 WDR82Q6UXN9 313 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 STARD4Q96DR4 205 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 BCL2L14Q9BZR8 327 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 OPN3Q9H1Y3 402 aaPredicted RBP12.25□□□□□ -0.45
TPM3-206ENST00000330188 TUBG2Q9NRH3 451 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 KCNIP1Q9NZI2 227 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 PRELID3BQ9Y3B1 194 aa12.25□□□□□ -0.45
TPM3-206ENST00000330188 IGHV2OR16-5A0A0B4J2B6 119 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 IGHV1-18A0A0C4DH31 117 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 C12orf77C9JDV5 145 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 GPR37O15354 613 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 TSPAN9O75954 239 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 CGAP01215 116 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 FABP6P51161 128 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 CCL20P78556 96 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 ZNF718Q3SXZ3 478 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 AKIRIN2Q53H80 203 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 RXFP4Q8TDU9 374 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 COQ2Q96H96 371 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 MSL2Q9HCI7 577 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 ZNF71Q9NQZ8 489 aaPredicted RBP12.24□□□□□ -0.45
TPM3-206ENST00000330188 WSB1Q9Y6I7 421 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 PRR14LQ5THK1 2151 aa12.24□□□□□ -0.45
TPM3-206ENST00000330188 OOEPA6NGQ2 149 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 SYNGR2O43760 224 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 DFFBO76075 338 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 TFF1P04155 84 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 AESQ08117 197 aa12.23□□□□□ -0.45
TPM3-206ENST00000330188 SP5Q6BEB4 398 aaPredicted RBP12.23□□□□□ -0.45
TPM3-206ENST00000330188 ZNF645Q8N7E2 425 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms