RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PRAMEF6Q5VXH4 476 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 BATF2Q8N1L9 274 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 OR2Z1Q8NG97 314 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 OR5B3Q8NH48 314 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 GNPNAT1Q96EK6 184 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-201ENST00000328923 PILRAQ9UKJ1 303 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 RARRES3Q9UL19 164 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 CRYM-AS1A6NIL9 109 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 COL9A1P20849 921 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 TFF2Q03403 129 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 GNMTQ14749 295 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 ZNF726P1Q15940 193 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 TMEM52Q8NDY8 209 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 VSTM2LQ96N03 204 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 VSIRQ9H7M9 311 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 GPR27Q9NS67 375 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 THYN1Q9P016 225 aa10.2□□□□□ -0.78
SHMT2-201ENST00000328923 DUXBA0A1W2PPF3 345 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 SHISA7A6NL88 538 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 GYPAP02724 150 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 GPX1P07203 203 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 ZNF133P52736 654 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-201ENST00000328923 RELBQ01201 579 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 CD226Q15762 336 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 PLPPR5Q32ZL2 321 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 C2orf27AQ580R0 203 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 TSPO2Q5TGU0 170 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 WDR82Q6UXN9 313 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 RNF44Q7L0R7 432 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 MARCH3Q86UD3 253 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 NEUROG1Q92886 237 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 C8orf44Q96CB5 159 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 S1PR5Q9H228 398 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 NRN1Q9NPD7 142 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 SLC17A4Q9Y2C5 497 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 WASHC3Q9Y3C0 194 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 MPDZO75970 2070 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 ATG2BQ96BY7 2078 aa10.19□□□□□ -0.78
SHMT2-201ENST00000328923 SPAARA0A1B0GVQ0 90 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 LATO43561 262 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 SRSF10O75494 262 aaKnown RBP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 HAND1O96004 215 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 HLA-HP01893 362 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 SNU13P55769 128 aaKnown RBP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 PPP1CBP62140 327 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 SRSF7Q16629 238 aaKnown RBP eCLIP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 C5orf64Q2M2E5 130 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 SUMF1Q8NBK3 374 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 OR4N2Q8NGD1 307 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 REPIN1Q9BWE0 567 aaKnown RBP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 MBNL1Q9NR56 388 aaKnown RBP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 RPRMQ9NS64 109 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 R4GMQ9 66 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 PHF3Q92576 2039 aaKnown RBP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 MUC21A0A0G2JKD1 596 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 MUC21A0A140T8X8 626 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 A0A1W2PP55 124 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 DPRXA6NFQ7 191 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 K7EQS6 105 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 ZNF253O75346 499 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 HIST1H1DP16402 221 aaKnown RBP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 DUSP1P28562 367 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 KIR2DL1P43626 348 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 DLX2Q07687 328 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 TMEM267Q0VDI3 215 aaPredicted RBP10.18□□□□□ -0.78
SHMT2-201ENST00000328923 ARFRP1Q13795 201 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 KIR2DS3Q14952 304 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 MUC21Q5SSG8 566 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 C1orf140Q5VVS0 124 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 RNF144BQ7Z419 303 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 DEFB125Q8N687 156 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 OR4P4Q8NGL7 312 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 FLVCR1-AS1Q8TAF5 88 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 LRFN3Q9BTN0 628 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 TM2D1Q9BX74 207 aa10.18□□□□□ -0.78
SHMT2-201ENST00000328923 SLC33A1O00400 549 aaPredicted RBP10.17□□□□□ -0.78
SHMT2-201ENST00000328923 HS3ST1O14792 307 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 CEACAM5P06731 702 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 CBLN1P23435 193 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 GDF1P27539 372 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 HTD2P86397 168 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 BAXQ07812 192 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 SPIN3Q5JUX0 258 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 PHYHD1Q5SRE7 291 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 LCN12Q6JVE5 192 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 MRPL21Q7Z2W9 205 aaKnown RBP10.17□□□□□ -0.78
SHMT2-201ENST00000328923 COMMD2Q86X83 199 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 CA13Q8N1Q1 262 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 DDIT4LQ96D03 193 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 RTN4RQ9BZR6 473 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 LOC107986453A0A1B0GWG9 222 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 TTRP02766 147 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 C3orf79P0CE67 100 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 PMCHP20382 165 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 TNFRSF4P43489 277 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 TMEM50BP56557 158 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 EGR4Q05215 589 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 TMEM187Q14656 261 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 TMEM252Q8N6L7 170 aa10.17□□□□□ -0.78
SHMT2-201ENST00000328923 ARHGAP5-AS1Q96IT6 56 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms