RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 CEACAM21Q3KPI0 293 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 LCN15Q6UWW0 184 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 OR13G1Q8NGZ3 307 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 SPENQ96T58 3664 aaKnown RBP8.89□□□□□ -0.99
SF3B2-201ENST00000322535 HSPB9Q9BQS6 159 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 BANF2Q9H503 90 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 C1orf123Q9NWV4 160 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 OCIAD1Q9NX40 245 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 P4HTMQ9NXG6 502 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 THYN1Q9P016 225 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 NSG2Q9Y328 171 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 B3GALT1Q9Y5Z6 326 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 H7BYZ3 331 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 NXPH3O95157 252 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 CNIH1O95406 144 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 GPR75O95800 540 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 SERPINA7P05543 415 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 SCGB1A1P11684 91 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 GCH1P30793 250 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 PAFAH1B2P68402 229 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 MFGE8Q08431 387 aaPredicted RBP8.89□□□□□ -0.99
SF3B2-201ENST00000322535 MLC1Q15049 377 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 TMEM249Q2WGJ8 235 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 FAM166AQ6J272 317 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 ARHGEF39Q8N4T4 335 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 C5orf17Q8NAS9 161 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 OR52R1Q8NGF1 315 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 RNF114Q9Y508 228 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 GTF3C1Q12789 2109 aa8.89□□□□□ -0.99
SF3B2-201ENST00000322535 DOCK11Q5JSL3 2073 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 NSG1A0A0A6YYJ2 146 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 TRBV7-9A0A0J9YWB2 115 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 A0A0U1RQK1 487 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 FAM24AA6NFZ4 105 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 CDIPTO14735 213 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 LILRA1O75019 489 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 MPLP40238 635 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 ATP5J2P56134 94 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 FAM3BP58499 235 aaPredicted RBP8.88□□□□□ -0.99
SF3B2-201ENST00000322535 KRTDAPP60985 99 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 ZFP36L1Q07352 338 aaKnown RBP8.88□□□□□ -0.99
SF3B2-201ENST00000322535 TSPO2Q5TGU0 170 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 C16orf47Q6ZP98 133 aaPredicted RBP8.88□□□□□ -0.99
SF3B2-201ENST00000322535 OR1B1Q8NGR6 318 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 CLDND2Q8NHS1 167 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 ASB5Q8WWX0 329 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 CALHM2Q9HA72 323 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 SPACA6W5XKT8 324 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 C17orf51A8MQB3 221 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 CEBPZOSA8MTT3 80 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 CST7O76096 145 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 MPIG6BO95866 241 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 DBIP07108 87 aaKnown RBP8.88□□□□□ -0.99
SF3B2-201ENST00000322535 ESDP10768 282 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 CCL2P13500 99 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 GABRA3P34903 492 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 UNC119Q13432 240 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 FAM90A2PQ658T7 463 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 PRR22Q8IZ63 422 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 CHRNA10Q9GZZ6 450 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 SMDT1Q9H4I9 107 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 PRTFDC1Q9NRG1 225 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 MRPL27Q9P0M9 148 aaKnown RBP8.88□□□□□ -0.99
SF3B2-201ENST00000322535 ARHGAP21Q5T5U3 1957 aa8.88□□□□□ -0.99
SF3B2-201ENST00000322535 TAX1BP3O14907 124 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 SOCS1O15524 211 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 CCL4P13236 92 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 TSPOP30536 169 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 CLDN17P56750 224 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 CTXN1P60606 82 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 MRPS34P82930 218 aaKnown RBP8.87□□□□□ -0.99
SF3B2-201ENST00000322535 ZNF506Q5JVG8 444 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 DCST2Q5T1A1 773 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 GPR157Q5UAW9 335 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 DNM1P34Q6PK57 102 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 GATSQ8NAP1 163 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 OR2Y1Q8NGV0 311 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 ZNF665Q9H7R5 613 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 MAP1BP46821 2468 aaKnown RBP8.87□□□□□ -0.99
SF3B2-201ENST00000322535 IGHV5-10-1A0A0J9YXX1 117 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 A0A1B0GW64 132 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 CCNOP22674 350 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 OTX1P32242 354 aaPredicted RBP8.87□□□□□ -0.99
SF3B2-201ENST00000322535 SRPXP78539 464 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 PRICKLE4Q2TBC4 344 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 TMEM41BQ5BJD5 291 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 C9orf40Q8IXQ3 194 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 CMTM2Q8TAZ6 248 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 PTPMT1Q8WUK0 201 aaPredicted RBP8.87□□□□□ -0.99
SF3B2-201ENST00000322535 FGGYQ96C11 551 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 ATP5SQ99766 215 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 SMIM7Q9BQ49 75 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 LMF2Q9BU23 707 aaKnown RBP8.87□□□□□ -0.99
SF3B2-201ENST00000322535 B3GALT5Q9Y2C3 310 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 RHBDD3Q9Y3P4 386 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 KIAA2026Q5HYC2 2103 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 IGLC7A0M8Q6 106 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 HSPB2A8KAH6 182 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 SHISA8B8ZZ34 492 aa8.87□□□□□ -0.99
SF3B2-201ENST00000322535 ZNF878C9JN71 531 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms