RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 C1orf100Q5SVJ3 147 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HES3Q5TGS1 186 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 TMEM178AQ8NBL3 297 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 DEFB124Q8NES8 71 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 OR10S1Q8NGN2 331 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 NTNG2Q96CW9 530 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 GPR35Q9HC97 309 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H2BKO60814 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H2BJP06899 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H2BOP23527 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H2BBP33778 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H2BDP58876 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 ERVK-16P61578 105 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 LSM6P62312 80 aaKnown RBP13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H2BCP62807 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 OR8B8Q15620 311 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST2H2BEQ16778 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.19□□□□□ -0.3
VARS2-201ENST00000321897 VAX1Q5SQQ9 334 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 SLC25A47Q6Q0C1 308 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 UBALD2Q8IYN6 164 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H2BHQ93079 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 UHRF2Q96PU4 802 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H2BNQ99877 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H2BMQ99879 126 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 C20orf202A1L168 122 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 PRR19A6NJB7 356 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 PPYP01298 95 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 HIST1H1BP16401 226 aaKnown RBP13.19□□□□□ -0.3
VARS2-201ENST00000321897 EGR1P18146 543 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 BTNL8Q6UX41 500 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 ABHD5Q8WTS1 349 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 APOBEC3DQ96AK3 386 aaPredicted RBP13.19□□□□□ -0.3
VARS2-201ENST00000321897 FAM173AQ9BQD7 235 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 LRRK1Q38SD2 2015 aa13.19□□□□□ -0.3
VARS2-201ENST00000321897 F6UZH7 168 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 MT-CO3P00414 261 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 PCOLCEQ15113 449 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 OR4C5Q8NGB2 326 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 CYTL1Q9NRR1 136 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 CLCF1Q9UBD9 225 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 SPAARA0A1B0GVQ0 90 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 IL2RAP01589 272 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 CEACAM6P40199 344 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 CDPF1Q6NVV7 123 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 ZNF573Q86YE8 665 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 DNASE2BQ8WZ79 361 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 MUCL1Q96DR8 90 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 B3GAT1Q9P2W7 334 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 FRMPD3Q5JV73 1810 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 MPPED1O15442 326 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 CEBPDP49716 269 aaPredicted RBP13.18□□□□□ -0.3
VARS2-201ENST00000321897 TCL1AP56279 114 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 MRGPRDQ8TDS7 321 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 MTCH1Q9NZJ7 389 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 ZNF581Q9P0T4 197 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 IL36RNQ9UBH0 155 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 KLF13Q9Y2Y9 288 aaPredicted RBP13.18□□□□□ -0.3
VARS2-201ENST00000321897 IGHV1-45A0A0A0MS14 117 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 SPRY3O43610 288 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 SYNGR1O43759 233 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 RPLP1P05386 114 aaKnown RBP13.18□□□□□ -0.3
VARS2-201ENST00000321897 CXCL1P09341 107 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 DTYMKP23919 212 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 AMTP48728 403 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 DMRTA1Q5VZB9 504 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 CMTM2Q8TAZ6 248 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 H1FXQ92522 213 aaKnown RBP13.18□□□□□ -0.3
VARS2-201ENST00000321897 TAAR9Q96RI9 348 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 RTL8AQ9BWD3 113 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 PCNX3Q9H6A9 2034 aa13.18□□□□□ -0.3
VARS2-201ENST00000321897 HSBP1L1C9JCN9 74 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 SLC25A6P12236 298 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 IRF2P14316 349 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 FSTP19883 344 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 RTP5Q14D33 572 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 ACOT6Q3I5F7 207 aaPredicted RBP13.17□□□□□ -0.3
VARS2-201ENST00000321897 OR10P1Q8NGE3 313 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 OR1P1Q8NH06 330 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 BARX1Q9HBU1 254 aaPredicted RBP13.17□□□□□ -0.3
VARS2-201ENST00000321897 OR3A1P47881 315 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 SOX8P57073 446 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 ZP4Q12836 540 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 CSRP2Q16527 193 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 Q6ZN92 141 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 PAQR4Q8N4S7 273 aaPredicted RBP13.17□□□□□ -0.3
VARS2-201ENST00000321897 TMEM230Q96A57 120 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 ACTR3CQ9C0K3 210 aaPredicted RBP13.17□□□□□ -0.3
VARS2-201ENST00000321897 CHCHD2Q9Y6H1 151 aaPredicted RBP13.17□□□□□ -0.3
VARS2-201ENST00000321897 ATRXP46100 2492 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 NPIPB7O75200 414 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 ACTL6BO94805 426 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 CLPSP04118 112 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 SOD3P08294 240 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 SUCLG1P53597 346 aaKnown RBP13.17□□□□□ -0.3
VARS2-201ENST00000321897 TPPP2P59282 170 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 SLC35B1P78383 322 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 FFAR4Q5NUL3 377 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 SLC23A3Q6PIS1 610 aa13.17□□□□□ -0.3
VARS2-201ENST00000321897 ZNF826PQ6ZT77 177 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms