RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 WDR5BQ86VZ2 330 aa12.19□□□□□ -0.46
PABPC1-201ENST00000318607 MOB3AQ96BX8 217 aa12.19□□□□□ -0.46
PABPC1-201ENST00000318607 OR4C12Q96R67 309 aa12.19□□□□□ -0.46
PABPC1-201ENST00000318607 ATP5SQ99766 215 aa12.19□□□□□ -0.46
PABPC1-201ENST00000318607 HINT2Q9BX68 163 aa12.19□□□□□ -0.46
PABPC1-201ENST00000318607 CFAP47Q6ZTR5 3102 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 EIF3IQ13347 325 aaKnown RBP12.18□□□□□ -0.46
PABPC1-201ENST00000318607 SLC10A1Q14973 349 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 TMEM241Q24JQ0 296 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 TPRX1Q8N7U7 411 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 OR2M3Q8NG83 312 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 SPACA9Q96E40 222 aaPredicted RBP12.18□□□□□ -0.46
PABPC1-201ENST00000318607 PRRG4Q9BZD6 226 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 V9GYS6 101 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 ATMQ13315 3056 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 SPTAN1Q13813 2472 aaKnown RBP12.18□□□□□ -0.46
PABPC1-201ENST00000318607 TMEM238LA0A1B0GVL6 79 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 SLC22A20A6NK97 555 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 OTX2P32243 289 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 UCP3P55916 312 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 TAS2R30P59541 319 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 GCSAMLQ5JQS6 135 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 M1APQ8TC57 530 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 PITPNC1Q9UKF7 332 aa12.18□□□□□ -0.46
PABPC1-201ENST00000318607 RIF1Q5UIP0 2472 aaKnown RBP12.18□□□□□ -0.46
PABPC1-201ENST00000318607 CLEC18AA5D8T8 446 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 CEACAM18A8MTB9 384 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 NGFP01138 241 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 COX5BP10606 129 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 CEACAM1P13688 526 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 NTF4P34130 210 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 PSG4Q00888 419 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 TDRG1Q3Y452 100 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 GUSBP11Q6P575 273 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 MRPL21Q7Z2W9 205 aaKnown RBP12.17□□□□□ -0.46
PABPC1-201ENST00000318607 CLEC18CQ8NCF0 446 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 OR4D5Q8NGN0 318 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 LYPD6BQ8NI32 183 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 RHBDD1Q8TEB9 315 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 PARD6GQ9BYG4 376 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-201ENST00000318607 RARRES3Q9UL19 164 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 TRAPPC2LH3BP13 241 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 PITX3O75364 302 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 VDAC1P21796 283 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 S100GP29377 79 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 EDDM3BP56851 147 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 FAM90A2PQ658T7 463 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 TEX38Q6PEX7 206 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 OR10J5Q8NHC4 309 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 TBX15Q96SF7 602 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 SRXN1Q9BYN0 137 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 TRAPPC2LQ9UL33 140 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 C2CD4DB7Z1M9 353 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 LMO7DNF2Z398 122 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 HSPB1P04792 205 aaKnown RBP12.17□□□□□ -0.46
PABPC1-201ENST00000318607 CEBPDP49716 269 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-201ENST00000318607 FOXG1P55316 489 aaPredicted RBP12.17□□□□□ -0.46
PABPC1-201ENST00000318607 OR5D13Q8NGL4 314 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 MRPL30Q8TCC3 161 aaKnown RBP12.17□□□□□ -0.46
PABPC1-201ENST00000318607 MALSU1Q96EH3 234 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 MS4A10Q96PG2 267 aa12.17□□□□□ -0.46
PABPC1-201ENST00000318607 IGHV3-43A0A0B4J1X8 118 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 AQP7P3A6NL99 342 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 TP53I11O14683 189 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 IGHV3-43DP0DP04 118 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 TNCP24821 2201 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 C3AR1Q16581 482 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 C1orf185Q5T7R7 199 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 TCEAL6Q6IPX3 200 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 C20orf204Q6ZNR8 217 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 ST6GALNAC3Q8NDV1 305 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 VN1R17PQ8TDU5 208 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 ZNF501Q96CX3 271 aaPredicted RBP12.16□□□□□ -0.46
PABPC1-201ENST00000318607 DERL1Q9BUN8 251 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 SAMD10Q9BYL1 202 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 OR51I2Q9H344 312 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 CLEC1BQ9P126 229 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 RNF24Q9Y225 148 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 A0A0G2JMM0 328 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 LOC102723971A0A1B0GUV8 181 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 A0A1B0GWJ7 208 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 A0A1W2PPB8 328 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 A0A1W2PRS3 328 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 KIR3DP1A8MWS1 328 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 CYB5R3P00387 301 aaPredicted RBP12.16□□□□□ -0.46
PABPC1-201ENST00000318607 ARF1P84077 181 aaKnown RBP12.16□□□□□ -0.46
PABPC1-201ENST00000318607 KIAA1644Q3SXP7 199 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 TGOLN2O43493 480 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 MDH2P40926 338 aaKnown RBP12.16□□□□□ -0.46
PABPC1-201ENST00000318607 ZNF726P1Q15940 193 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 MKXQ8IYA7 352 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 ATOH7Q8N100 152 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 SNHG12Q9BXW3 62 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 C12orf49Q9H741 205 aa12.16□□□□□ -0.46
PABPC1-201ENST00000318607 LOC102724200A0A096LPH7 203 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-201ENST00000318607 TRAV38-1A0A0B4J264 116 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 A0A1B0GU03 582 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 ECI1P42126 302 aa12.15□□□□□ -0.46
PABPC1-201ENST00000318607 RBM11P57052 281 aaKnown RBP12.15□□□□□ -0.46
PABPC1-201ENST00000318607 KRTDAPP60985 99 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms