RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 IDSB3KWA1 339 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 J3QR06 171 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 F13BP05160 661 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 FGF5P12034 268 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 FCER1GP30273 86 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 MEOX1P50221 254 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 HERVK_113P61574 105 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 TMPRSS9Q7Z410 1059 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 PEX11GQ96HA9 241 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 IL17FQ96PD4 163 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ADOQ96SZ5 270 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 FAM117AQ9C073 453 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 FUT9Q9Y231 359 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 CORTO00230 105 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 TNFSF13O75888 250 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ACTL6AO96019 429 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 APCSP02743 223 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 UMODP07911 640 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 BTCP35070 178 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ERHP84090 104 aaKnown RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 INSM1Q01101 510 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 SIGLEC14Q08ET2 396 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 EIF4EBP2Q13542 120 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ATP5L2Q7Z4Y8 100 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 CA13Q8N1Q1 262 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 LILRA3Q8N6C8 439 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 OR10G3Q8NGC4 313 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 TSPAN32Q96QS1 320 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 MS4A6AQ9H2W1 248 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 DNAJC4Q9NNZ3 241 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 PLSCR2Q9NRY7 297 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 TMEM106BQ9NUM4 274 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 IL36GQ9NZH8 169 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 IL17BQ9UHF5 180 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 SLC25A17O43808 307 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 NTF3P20783 257 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 HHEXQ03014 270 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 SQSTM1Q13501 440 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 MRPL58Q14197 206 aaKnown RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 TSEN54Q7Z6J9 526 aaKnown RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 HIST3H2BBQ8N257 126 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 RBMXL3Q8N7X1 1067 aaKnown RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 APCDD1LQ8NCL9 501 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 OR10AG1Q8NH19 301 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 CA5BP1Q8WTZ4 195 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 KLK6Q92876 244 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 GRAMD2BQ96HH9 432 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 GNB1LQ9BYB4 327 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 IL21Q9HBE4 155 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 HIF1ANQ9NWT6 349 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ATXN7L1Q9ULK2 861 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 DTX4Q9Y2E6 619 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 LILRA5A6NI73 299 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 A8MWL6 223 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 TMPRSS11DO60235 418 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 EPPINO95925 133 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 HPRT1P00492 218 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 TYMSP04818 313 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 RUNX2Q13950 521 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 AMMECR1LQ6DCA0 310 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 CPEB3Q8NE35 698 aaKnown RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 SF3B5Q9BWJ5 86 aaKnown RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 IGFLR1Q9H665 355 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 PRDM7Q9NQW5 492 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 CD207Q9UJ71 328 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 HECTD1Q9ULT8 2610 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 A0A1W2PPC1 479 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 LRRC30A6NM36 301 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 H0YL77 283 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 LMX1BO60663 402 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 NPY1RP25929 384 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ELLP55199 621 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ZP1P60852 638 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ZNF468Q5VIY5 522 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 VWA1Q6PCB0 445 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 VASH2Q86V25 355 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 MYPOPQ86VE0 399 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 FAM169BQ8N8A8 192 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 NUDT10Q8NFP7 164 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 ERGIC1Q969X5 290 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 CLDN23Q96B33 292 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 CNRIP1Q96F85 164 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 CDX2Q99626 313 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 FAM173AQ9BQD7 235 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 MESP1Q9BRJ9 268 aa3.97□□□□□ -1.77
CNOT1-201ENST00000317147 MBNL1Q9NR56 388 aaKnown RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 CGGBP1Q9UFW8 167 aaPredicted RBP3.97□□□□□ -1.77
CNOT1-201ENST00000317147 TMEM30CPA0ZSE6 113 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 A8MWP6 167 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 VIPR2P41587 438 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 C16orf82Q7Z2V1 217 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 TMEM251Q8N6I4 163 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 OR13G1Q8NGZ3 307 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 PIGTQ969N2 578 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 SLC25A38Q96DW6 304 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 HIST1H2BLQ99880 126 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 QTRT1Q9BXR0 403 aaKnown RBP3.96□□□□□ -1.77
CNOT1-201ENST00000317147 RARRES3Q9UL19 164 aa3.96□□□□□ -1.77
CNOT1-201ENST00000317147 OR2W1Q9Y3N9 320 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms