RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 Q9UFV3 132 aa12□□□□□ -0.49
VRK3-201ENST00000316763 NDRG3Q9UGV2 375 aa12□□□□□ -0.49
VRK3-201ENST00000316763 OR2W1Q9Y3N9 320 aa12□□□□□ -0.49
VRK3-201ENST00000316763 CLEC18AA5D8T8 446 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 ATP6V1G2-DDX39BF2Z307 99 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 AGPAT2O15120 278 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 ADAM20O43506 726 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 CBR1P16152 277 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 CTRB1P17538 263 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 CD80P33681 288 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 PPP1CBP62140 327 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 PEA15Q15121 130 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 HMGN3Q15651 99 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 CTRB2Q6GPI1 263 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 CLEC18CQ8NCF0 446 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 PRR7Q8TB68 274 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 VKORC1Q9BQB6 163 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 AIFM2Q9BRQ8 373 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 CABLES2Q9BTV7 478 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 TREM2Q9NZC2 230 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 PCNX1Q96RV3 2341 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 A0A1W2PR80 420 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 H7C2Y5 167 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 PGLYRP1O75594 196 aaPredicted RBP11.99□□□□□ -0.49
VRK3-201ENST00000316763 IGKV3-15P01624 115 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 PRH1P02810 166 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 SELEP16581 610 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 BHLHA15Q7RTS1 189 aaPredicted RBP11.99□□□□□ -0.49
VRK3-201ENST00000316763 C5orf24Q7Z6I8 188 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 H1FOOQ8IZA3 346 aaPredicted RBP11.99□□□□□ -0.49
VRK3-201ENST00000316763 C11orf1Q9H5F2 150 aa11.99□□□□□ -0.49
VRK3-201ENST00000316763 FAM24AA6NFZ4 105 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 OR5H1A6NKK0 313 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 A8MXE2 369 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 WRBO00258 174 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 CCL21O00585 134 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 SMPD2O60906 423 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 PITX3O75364 302 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 RHBDL1O75783 438 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 OR8U9P0C7N5 309 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 HOXC12P31275 282 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 POLR2GP62487 172 aaKnown RBP eCLIP11.98□□□□□ -0.49
VRK3-201ENST00000316763 ZNF616Q08AN1 781 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 NMSQ5H8A3 153 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 Q6P435 159 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 MYPOPQ86VE0 399 aaPredicted RBP11.98□□□□□ -0.49
VRK3-201ENST00000316763 FAM169BQ8N8A8 192 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 OR8U1Q8NH10 309 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 LILRB1Q8NHL6 650 aaPredicted RBP11.98□□□□□ -0.49
VRK3-201ENST00000316763 C19orf12Q9NSK7 152 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 LYRM2Q9NU23 88 aaPredicted RBP11.98□□□□□ -0.49
VRK3-201ENST00000316763 CACFD1Q9UGQ2 172 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 KPTNQ9Y664 436 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 NPIPB11E5RHQ5 1161 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 HSPA12AO43301 675 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 SSSCA1O60232 199 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 CELA3BP08861 270 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 H2AFB1P0C5Y9 115 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 RAC2P15153 192 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 F2RP25116 425 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 SNCAP37840 140 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 FLI1Q01543 452 aaPredicted RBP11.98□□□□□ -0.49
VRK3-201ENST00000316763 MIDNQ504T8 468 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 TMEM88Q6PEY1 159 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 C20orf204Q6ZNR8 217 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 HSD17B11Q8NBQ5 300 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 SCCPDHQ8NBX0 429 aa11.98□□□□□ -0.49
VRK3-201ENST00000316763 ADAT1Q9BUB4 502 aaKnown RBP11.98□□□□□ -0.49
VRK3-201ENST00000316763 ERRFI1Q9UJM3 462 aaPredicted RBP11.98□□□□□ -0.49
VRK3-201ENST00000316763 SH2D1BO14796 132 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 TSPAN9O75954 239 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 IGLV1-44P01699 117 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 SERPINE2P07093 398 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 BMP5P22003 454 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 NPBWR1P48145 328 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 IDH3GP51553 393 aaPredicted RBP11.97□□□□□ -0.49
VRK3-201ENST00000316763 ID3Q02535 119 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 BAXQ07812 192 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 SHEQ5VZ18 495 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 FIP1L1Q6UN15 594 aaKnown RBP11.97□□□□□ -0.49
VRK3-201ENST00000316763 MRGPRGQ86SM5 289 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 LFNGQ8NES3 379 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 OR10V1Q8NGI7 309 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 OR2J1Q9GZK6 312 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 PARP12Q9H0J9 701 aaKnown RBP11.97□□□□□ -0.49
VRK3-201ENST00000316763 JKAMPQ9P055 326 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 SLC25A15Q9Y619 301 aa11.97□□□□□ -0.49
VRK3-201ENST00000316763 RELNP78509 3460 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 ZNF462Q96JM2 2506 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 HIVEP3Q5T1R4 2406 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 IGSF23A1L1A6 192 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 TMEM210A6NLX4 147 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 NXPH2O95156 264 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 F12P00748 615 aaPredicted RBP11.96□□□□□ -0.49
VRK3-201ENST00000316763 WNT2P09544 360 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 SLC25A6P12236 298 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 UCP2P55851 309 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 CXorf66Q5JRM2 361 aaPredicted RBP11.96□□□□□ -0.49
VRK3-201ENST00000316763 TIMM23BQ5SRD1 257 aa11.96□□□□□ -0.49
VRK3-201ENST00000316763 TMEM252Q8N6L7 170 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms