RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 POU2AF1Q16633 256 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF343Q6P1L6 599 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 C22orf34Q6ZV56 151 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 NUFIP2Q7Z417 695 aaKnown RBP6.48□□□□□ -1.37
CNOT4-201ENST00000315544 GALNTL5Q7Z4T8 443 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 OR2C3Q8N628 320 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 C14orf144Q96I85 54 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 NEU1Q99519 415 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 PARPBPQ9NWS1 579 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF816-ZNF321PA0A0X1KG74 233 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 SMPD2O60906 423 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 NRASP01111 189 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 ATF4P18848 351 aaPredicted RBP6.48□□□□□ -1.37
CNOT4-201ENST00000315544 FUT3P21217 361 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 KITLGP21583 273 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 PSG7Q13046 419 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 IAH1Q2TAA2 248 aaPredicted RBP6.48□□□□□ -1.37
CNOT4-201ENST00000315544 DMRTC2Q8IXT2 367 aaPredicted RBP6.48□□□□□ -1.37
CNOT4-201ENST00000315544 SUMF2Q8NBJ7 301 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 RAB39BQ96DA2 213 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 GPHA2Q96T91 129 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 MICU1Q9BPX6 476 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF471Q9BX82 626 aaPredicted RBP6.48□□□□□ -1.37
CNOT4-201ENST00000315544 RARRES3Q9UL19 164 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 DMRT1Q9Y5R6 373 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 CACNA1HO95180 2353 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 LINC00473A8K010 186 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 ITGB1BP1O14713 200 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 SGCEO43556 437 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 GMFGO60234 142 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 TNFSF13O75888 250 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF823P16415 610 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 CTRLP40313 264 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 INPP1P49441 399 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF134P52741 427 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 PRSS12P56730 875 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 RAB4BP61018 213 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 GNB2P62879 340 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 FBXL19-AS1Q494R0 122 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 AVPI1Q5T686 147 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 RUSC1-AS1Q66K80 236 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 RPS19BP1Q86WX3 136 aaKnown RBP6.48□□□□□ -1.37
CNOT4-201ENST00000315544 OR1K1Q8NGR3 316 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 SGCZQ96LD1 299 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 ACTR3CQ9C0K3 210 aaPredicted RBP6.48□□□□□ -1.37
CNOT4-201ENST00000315544 WDR61Q9GZS3 305 aaKnown RBP6.48□□□□□ -1.37
CNOT4-201ENST00000315544 OR1A1Q9P1Q5 309 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 SEC16AO15027 2179 aa6.48□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF705EA8MWA4 302 aaPredicted RBP6.47□□□□□ -1.37
CNOT4-201ENST00000315544 APLNRP35414 380 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 RBP2P50120 134 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 SNRPEP62304 92 aaKnown RBP6.47□□□□□ -1.37
CNOT4-201ENST00000315544 CLINT1Q14677 625 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 TAF9Q16594 264 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 OR5D18Q8NGL1 313 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 C11orf52Q96A22 123 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 P2RX4Q99571 388 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 A0A1W2PPE2 198 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 RRHO14718 337 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 XRCC2O43543 280 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 RAMP3O60896 148 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 JMJD7P0C870 316 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 TCN2P20062 427 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 VDAC1P21796 283 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 RBMXP38159 391 aaKnown RBP6.47□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF41P51814 821 aaPredicted RBP6.47□□□□□ -1.37
CNOT4-201ENST00000315544 ARL6IP1Q15041 203 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 SSX2Q16385 188 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 PRR18Q8N4B5 295 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 C11orf42Q8N5U0 333 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 LINC00469Q8N7U9 141 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 CHST4Q8NCG5 386 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 ST6GALNAC3Q8NDV1 305 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 SLC22A8Q8TCC7 542 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 MBD6Q96DN6 1003 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 FAM71F1Q96KD3 344 aaPredicted RBP6.47□□□□□ -1.37
CNOT4-201ENST00000315544 ATP5SQ99766 215 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 HES7Q9BYE0 225 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 RPRMQ9NS64 109 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 KIR2DL5BA0A0G2JN68 375 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 KIR2DL5BA0A0G2JPC4 375 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 RBFOX3A6NFN3 312 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 AHRRA9YTQ3 701 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 FAM90A26D6RGX4 464 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 SERPINA5P05154 406 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 HIST1H1BP16401 226 aaKnown RBP6.47□□□□□ -1.37
CNOT4-201ENST00000315544 OR3A2P47893 321 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 LRRC37A5PQ49AS3 106 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 KHDC3LQ587J8 217 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 MBNL2Q5VZF2 373 aaKnown RBP6.47□□□□□ -1.37
CNOT4-201ENST00000315544 KIR2DL5AQ8N109 375 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 OR5R1Q8NH85 324 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 THAP6Q8TBB0 222 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 SIRT7Q9NRC8 400 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 ST3GAL6Q9Y274 331 aa6.47□□□□□ -1.37
CNOT4-201ENST00000315544 F2RL2O00254 374 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 OPN1LWP04000 364 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 SERPINA7P05543 415 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 ZNF20P17024 532 aa6.46□□□□□ -1.37
CNOT4-201ENST00000315544 BTF3P20290 206 aaKnown RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms