RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 DUXBA0A1W2PPF3 345 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 MEX3AA1L020 520 aaKnown RBP15.37■□□□□ 0.05
CCDC43-201ENST00000315286 ABCD4O14678 606 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 LHBP01229 141 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 VDAC1P21796 283 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 RPL7L1Q6DKI1 246 aaKnown RBP15.37■□□□□ 0.05
CCDC43-201ENST00000315286 FAM90A1Q86YD7 464 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 DMBX1Q8NFW5 382 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 OR13A1Q8NGR1 328 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 RND1Q92730 232 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 IL22RA2Q969J5 263 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 ZDHHC8Q9ULC8 765 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 POMT1Q9Y6A1 747 aa15.37■□□□□ 0.05
CCDC43-201ENST00000315286 TAAR5O14804 337 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 IGHV1-46P01743 117 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 TMEM33P57088 247 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 CLEC9AQ6UXN8 241 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 TMED6Q8WW62 240 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 MARVELD3Q96A59 401 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 SPIN2AQ99865 258 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 SPIN2BQ9BPZ2 258 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 DCTN5Q9BTE1 182 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 BARX1Q9HBU1 254 aaPredicted RBP15.36■□□□□ 0.05
CCDC43-201ENST00000315286 FBXL17Q9UF56 701 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 RCL1Q9Y2P8 373 aaKnown RBP15.36■□□□□ 0.05
CCDC43-201ENST00000315286 ZZEF1O43149 2961 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 POLEQ07864 2286 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 DSCAMO60469 2012 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 WNT2P09544 360 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 EDDM3AQ14507 147 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 GNMTQ14749 295 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 DRAM1Q8N682 238 aa15.36■□□□□ 0.05
CCDC43-201ENST00000315286 CLEC18AA5D8T8 446 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 SERPINE2P07093 398 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 SSTR5P35346 364 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 GATA4P43694 442 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 NKX2-1P43699 371 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-201ENST00000315286 TNFAIP6P98066 277 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-201ENST00000315286 BSPH1Q075Z2 132 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 CXorf66Q5JRM2 361 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-201ENST00000315286 FAM201AQ5SY85 155 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 CLEC18CQ8NCF0 446 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 ERGIC1Q969X5 290 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 BSCL2Q96G97 398 aaPredicted RBP15.35■□□□□ 0.05
CCDC43-201ENST00000315286 LURAP1Q96LR2 239 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 VKORC1Q9BQB6 163 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 SMIM3Q9BZL3 60 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 GCM1Q9NP62 436 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 RNF150Q9ULK6 438 aa15.35■□□□□ 0.05
CCDC43-201ENST00000315286 ATXN7O15265 892 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-201ENST00000315286 P2RY1P47900 373 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 PAX5Q02548 391 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 ARL11Q969Q4 196 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 IL19Q9UHD0 177 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 DIDO1Q9BTC0 2240 aaKnown RBP15.34■□□□□ 0.05
CCDC43-201ENST00000315286 USF3Q68DE3 2245 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 TRGV8A0A0C4DH27 118 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 A0A0G2JRQ6 117 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 POLR2GP62487 172 aaKnown RBP eCLIP15.34■□□□□ 0.05
CCDC43-201ENST00000315286 THOC7Q6I9Y2 204 aaKnown RBP15.34■□□□□ 0.05
CCDC43-201ENST00000315286 ZNRF1Q8ND25 227 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 RFESDQ8TAC1 157 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 SNX22Q96L94 193 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 C11orf1Q9H5F2 150 aa15.34■□□□□ 0.05
CCDC43-201ENST00000315286 SEBOXQ9HB31 216 aaPredicted RBP15.34■□□□□ 0.05
CCDC43-201ENST00000315286 SMG1Q96Q15 3661 aaKnown RBP15.33■□□□□ 0.05
CCDC43-201ENST00000315286 GPR137BO60478 399 aa15.33■□□□□ 0.04
CCDC43-201ENST00000315286 IGKV1-39P01597 117 aa15.33■□□□□ 0.04
CCDC43-201ENST00000315286 IGKV1D-39P04432 117 aa15.33■□□□□ 0.04
CCDC43-201ENST00000315286 ZNF16P17020 682 aaPredicted RBP15.33■□□□□ 0.04
CCDC43-201ENST00000315286 PPP1CCP36873 323 aaKnown RBP15.33■□□□□ 0.04
CCDC43-201ENST00000315286 GPR157Q5UAW9 335 aa15.33■□□□□ 0.04
CCDC43-201ENST00000315286 WFIKKN1Q96NZ8 548 aa15.33■□□□□ 0.04
CCDC43-201ENST00000315286 TOLLIPQ9H0E2 274 aa15.33■□□□□ 0.04
CCDC43-201ENST00000315286 ESRP2Q9H6T0 727 aaKnown RBP15.33■□□□□ 0.04
CCDC43-201ENST00000315286 DYSFO75923 2080 aa15.33■□□□□ 0.04
CCDC43-201ENST00000315286 C15orf65H3BRN8 121 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 FGF16O43320 207 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 CD80P33681 288 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 ADIPOQQ15848 244 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 ZNF585BQ52M93 769 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 ANGPTL6Q8NI99 470 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 NINJ1Q92982 152 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 GPR146Q96CH1 333 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 MAGT1Q9H0U3 335 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 OR2D2Q9H210 308 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 RNF7Q9UBF6 113 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 IGHV3-43A0A0B4J1X8 118 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 A0A1B0GW55 424 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 MGST3O14880 152 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 FGF2P09038 288 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 OR4A8P0C604 315 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 FAM157CP0CG43 387 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 DUX4L2P0CJ85 424 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 DUX4L3P0CJ86 424 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 DUX4L4P0CJ87 422 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 DUX4L5P0CJ88 424 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 DUX4L6P0CJ89 424 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 DUX4L7P0CJ90 424 aa15.32■□□□□ 0.04
CCDC43-201ENST00000315286 IGHV3-43DP0DP04 118 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms