RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 KIAA2026Q5HYC2 2103 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 PDPNQ86YL7 162 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 BAP18Q8IXM2 172 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 RAB18Q9NP72 206 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 OR51B2Q9Y5P1 312 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 FANCMQ8IYD8 2048 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 CHST1O43916 411 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 B3GALNT1O75752 331 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 RPS4Y1P22090 263 aaKnown RBP11.66□□□□□ -0.54
RFFL-201ENST00000315249 CDKN1AP38936 164 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 RAB32Q13637 225 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 RAB5CP51148 216 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 DYNLT3P51808 116 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 SLC45A2Q9UMX9 530 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 C1QBP02746 253 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 PJVKQ0ZLH3 352 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 FAM222BQ8WU58 562 aa11.66□□□□□ -0.54
RFFL-201ENST00000315249 GSTZ1O43708 216 aaPredicted RBP11.65□□□□□ -0.54
RFFL-201ENST00000315249 CD40P25942 277 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 CRIPAKQ8N1N5 446 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 SPINK4O60575 86 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 PSG2P11465 335 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 MVDP53602 400 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 SCAND1P57086 179 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 C14orf79Q96F83 325 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 LIPFP07098 398 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 NFAM1Q8NET5 270 aaPredicted RBP11.65□□□□□ -0.54
RFFL-201ENST00000315249 SNX22Q96L94 193 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 FGF12P61328 243 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 UNQ5815/PRO19632Q6UWF5 114 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 RFLNBQ8N5W9 214 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 CHRNA10Q9GZZ6 450 aa11.65□□□□□ -0.54
RFFL-201ENST00000315249 OR2C3Q8N628 320 aa11.65□□□□□ -0.55
RFFL-201ENST00000315249 OR4X1Q8NH49 305 aa11.65□□□□□ -0.55
RFFL-201ENST00000315249 CTHRC1Q96CG8 243 aa11.65□□□□□ -0.55
RFFL-201ENST00000315249 POM121Q96HA1 1249 aa11.65□□□□□ -0.55
RFFL-201ENST00000315249 ABHD1Q96SE0 405 aa11.65□□□□□ -0.55
RFFL-201ENST00000315249 G3V3Q6 166 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 CA11O75493 328 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 FGF8P55075 233 aaPredicted RBP11.64□□□□□ -0.55
RFFL-201ENST00000315249 FAM219AQ8IW50 185 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 CADM3Q8N126 398 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 C11orf42Q8N5U0 333 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 FAM103A1Q9BTL3 118 aaKnown RBP11.64□□□□□ -0.55
RFFL-201ENST00000315249 GHITMQ9H3K2 345 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 ZG16O60844 167 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 UBE2L3P68036 154 aaKnown RBP11.64□□□□□ -0.55
RFFL-201ENST00000315249 RIPPLY2Q5TAB7 128 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 ABHD12Q8N2K0 398 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 RNASE6Q93091 150 aaKnown RBP11.64□□□□□ -0.55
RFFL-201ENST00000315249 VSIG8P0DPA2 414 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 ADAP1O75689 374 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 NANOS3P60323 173 aaKnown RBP11.64□□□□□ -0.55
RFFL-201ENST00000315249 FABP9Q0Z7S8 132 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 HCP5Q6MZN7 132 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 C16orf82Q7Z2V1 217 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 C9orf106Q8NAJ2 232 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 RPS4Y2Q8TD47 263 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 WFDC6Q9BQY6 131 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 LHFPL6Q9Y693 200 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 ID1P41134 155 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 DTD1Q8TEA8 209 aa11.64□□□□□ -0.55
RFFL-201ENST00000315249 SLC2A9Q9NRM0 540 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 KCNE5Q9UJ90 142 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 CDC34P49427 236 aaPredicted RBP11.63□□□□□ -0.55
RFFL-201ENST00000315249 ZFP36L1Q07352 338 aaKnown RBP11.63□□□□□ -0.55
RFFL-201ENST00000315249 PNKDQ8N490 385 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 ZNF407Q9C0G0 2248 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 NPY1RP25929 384 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 CFHR1Q03591 330 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 ATP5SQ99766 215 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 SYNGR2O43760 224 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 OR10G4Q8NGN3 311 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 OR10G9Q8NGN4 311 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 OR10G7Q8NGN6 311 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 SSBP3Q9BWW4 388 aaPredicted RBP11.63□□□□□ -0.55
RFFL-201ENST00000315249 WNT5BQ9H1J7 359 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 PCNX2A6NKB5 2137 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 GNG4P50150 75 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 IMMP1LQ96LU5 166 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 KPTNQ9Y664 436 aa11.63□□□□□ -0.55
RFFL-201ENST00000315249 TCAPO15273 167 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 ZIC3O60481 467 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 RAMP1O60894 148 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 CECR9P0C854 216 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 SPNP16150 400 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 GNLYP22749 145 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 OXA1LQ15070 435 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 FAM78BQ5VT40 261 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 GLRXP35754 106 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 KIR3DL2P43630 455 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 RPL27AP46776 148 aaKnown RBP11.62□□□□□ -0.55
RFFL-201ENST00000315249 PDZD11Q5EBL8 140 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 LINC00299Q6ZSB3 139 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 MARS2Q96GW9 593 aaKnown RBP11.62□□□□□ -0.55
RFFL-201ENST00000315249 WASHC3Q9Y3C0 194 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 ORM1P02763 201 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 CTSDP07339 412 aaPredicted RBP11.62□□□□□ -0.55
RFFL-201ENST00000315249 OR10Z1Q8NGY1 313 aa11.62□□□□□ -0.55
RFFL-201ENST00000315249 IDI2-AS1Q9NZ38 188 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms