RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZNF565Q8N9K5 539 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 S100PBPQ96BU1 408 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 TPRP12270 2363 aaKnown RBP10.51□□□□□ -0.73
RNF4-201ENST00000314289 FAM157AC9JC47 383 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 CGAP01215 116 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 BMP5P22003 454 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 ECI1P42126 302 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 FHITP49789 147 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 ASCL1P50553 236 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 Q6P435 159 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 BHLHA15Q7RTS1 189 aaPredicted RBP10.51□□□□□ -0.73
RNF4-201ENST00000314289 MSI2Q96DH6 328 aaKnown RBP10.51□□□□□ -0.73
RNF4-201ENST00000314289 MEMO1Q9Y316 297 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 ATP23Q9Y6H3 246 aa10.51□□□□□ -0.73
RNF4-201ENST00000314289 USF3Q68DE3 2245 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 C3orf85A0A1B0GTC6 90 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 A0A1W2PPE2 198 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 LRP5LA4QPB2 252 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A10PA6NDY2 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A18PA6NE21 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A16PA6NEW6 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A20PA6NIJ5 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A8PA6NJQ4 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A7PA6NKC0 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A22PA8MWA6 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A12PA8MX19 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A5PA8MXJ8 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A23PA8MXZ1 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 M0R1B8 84 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 MPPED1O15442 326 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A15PP0C7V4 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A13PP0C7W8 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A14PP0C7W9 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 FAM90A24PP0C7X0 464 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 LYL1P12980 280 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 TMEM33P57088 247 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 MSMPQ1L6U9 139 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 OR51H1Q8NH63 302 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 BSCL2Q96G97 398 aaPredicted RBP10.5□□□□□ -0.73
RNF4-201ENST00000314289 POM121Q96HA1 1249 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 PARP11Q9NR21 331 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 DNAJB11Q9UBS4 358 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 ERRFI1Q9UJM3 462 aaPredicted RBP10.5□□□□□ -0.73
RNF4-201ENST00000314289 TRAPPC2LQ9UL33 140 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 UBE2J1Q9Y385 318 aaPredicted RBP10.5□□□□□ -0.73
RNF4-201ENST00000314289 IGHV2OR16-5A0A0B4J2B6 119 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 PROB1E7EW31 1015 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 PSPNO60542 156 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 NDUFS6O75380 124 aaKnown RBP10.5□□□□□ -0.73
RNF4-201ENST00000314289 C1QL1O75973 258 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 MBPP02686 304 aaPredicted RBP10.5□□□□□ -0.73
RNF4-201ENST00000314289 OR8U8P0C7N1 319 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 RAB5AP20339 215 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 LIAT1Q6ZQX7 453 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 CISD2Q8N5K1 135 aaKnown RBP10.5□□□□□ -0.73
RNF4-201ENST00000314289 EDARADDQ8WWZ3 215 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 CNTNAP3Q9BZ76 1288 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 PKIBQ9C010 78 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 OR51M1Q9H341 326 aa10.5□□□□□ -0.73
RNF4-201ENST00000314289 IQCF6A8MYZ5 107 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 AGAP20933 346 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 IZUMO4Q1ZYL8 232 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 PCSK4Q6UW60 755 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 IGFL3Q6UXB1 125 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 SYT3Q9BQG1 590 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 SCNM1Q9BWG6 230 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 EGLN1Q9GZT9 426 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 TP53TG5Q9Y2B4 290 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 OR5H1A6NKK0 313 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 TAAR5O14804 337 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 PRH1P02810 166 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 FAM27E3Q08E93 113 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 GUK1Q16774 197 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 ERGIC1Q969X5 290 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 PLK3Q9H4B4 646 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 SEBOXQ9HB31 216 aaPredicted RBP10.49□□□□□ -0.73
RNF4-201ENST00000314289 METTL1Q9UBP6 276 aaKnown RBP10.49□□□□□ -0.73
RNF4-201ENST00000314289 FBXO7Q9Y3I1 522 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 NKX2-6A6NCS4 301 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 UMAD1C9J7I0 102 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 HSPA12AO43301 675 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 PGA5P0DJD9 388 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 OR13C7P0DN81 318 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 S100PP25815 95 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 SPRNQ5BIV9 151 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 OR8G5Q8NG78 346 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 OR10J5Q8NHC4 309 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 TCTEX1D2Q8WW35 142 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 GALNT14Q96FL9 552 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 MAGT1Q9H0U3 335 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 METRNQ9UJH8 293 aa10.49□□□□□ -0.73
RNF4-201ENST00000314289 COL6A6A6NMZ7 2263 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 KIR2DS1A0A191URI9 304 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 MBD3L4A6NDZ8 208 aaPredicted RBP10.48□□□□□ -0.73
RNF4-201ENST00000314289 MBD3L3A6NE82 208 aaPredicted RBP10.48□□□□□ -0.73
RNF4-201ENST00000314289 MBD3L5A6NJ08 208 aaPredicted RBP10.48□□□□□ -0.73
RNF4-201ENST00000314289 GCH1P30793 250 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 KIR2DS4P43632 304 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 CAMLGP49069 296 aa10.48□□□□□ -0.73
RNF4-201ENST00000314289 ERVK11-1P61568 191 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms