RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 LIPFP07098 398 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 IGHV3-43DP0DP04 118 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 GZMKP49863 264 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 DVL1P1P54792 670 aaPredicted RBP14.92□□□□□ -0.02
HMGA1-201ENST00000311487 BTNL3Q6UXE8 466 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 IL17RELQ6ZVW7 336 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 OR11H7Q8NGC8 314 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 LEAP2Q969E1 77 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 C1orf159Q96HA4 380 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 TMUB1Q9BVT8 246 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 C7orf69Q9H7B7 122 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 INSIG2Q9Y5U4 225 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 A0A1W2PRD5 423 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 A0A1W2PRF3 423 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 A0A1W2PRM7 423 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 GPR37O15354 613 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 PRAF2O60831 178 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 SCGNO76038 276 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 LY6G6DO95868 133 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 FCGR3AP08637 254 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 C17orf58Q2M2W7 97 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 METTL11BQ5VVY1 283 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 Q8N7P7 452 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 TMEM229BQ8NBD8 167 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 OR1L1Q8NH94 360 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 IL1F10Q8WWZ1 152 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 ARL11Q969Q4 196 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 POM121Q96HA1 1249 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 ZNF714Q96N38 554 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 TAF9BQ9HBM6 251 aa14.92□□□□□ -0.02
HMGA1-201ENST00000311487 TEP1Q99973 2627 aaKnown RBP14.91□□□□□ -0.02
HMGA1-201ENST00000311487 TRBV23-1A0A0A0MS06 115 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 C12orf77C9JDV5 145 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 H3BUI4 141 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 GLAP06280 429 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 GSTP1P09211 210 aaKnown RBP14.91□□□□□ -0.02
HMGA1-201ENST00000311487 SCTP09683 121 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 GSTT2P0CG29 244 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 ZNF728P0DKX0 622 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 NFYBP25208 207 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 KCNJ3P48549 501 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 TAS2R19P59542 299 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 OR52W1Q6IF63 320 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 STEAP1BQ6NZ63 245 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 C11orf42Q8N5U0 333 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 CAPSLQ8WWF8 208 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 YAE1D1Q9NRH1 226 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 LINC00312Q9Y6C7 94 aa14.91□□□□□ -0.02
HMGA1-201ENST00000311487 C1QBP02746 253 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 MELTFP08582 738 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 MECP2P51608 486 aaKnown RBP14.9□□□□□ -0.02
HMGA1-201ENST00000311487 KLRD1Q13241 179 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 RBMS2Q15434 407 aaKnown RBP14.9□□□□□ -0.02
HMGA1-201ENST00000311487 C8orf46Q8TAG6 207 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 KIRREL1Q96J84 757 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 CALYQ9NYX4 217 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 OR6C3Q9NZP0 311 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 TOX4O94842 621 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 DLX6P56179 175 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 IFITM2Q01629 132 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 MEF2CQ06413 473 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-201ENST00000311487 C1orf229Q6ZS94 237 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-201ENST00000311487 VMO1Q7Z5L0 202 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 GAPTQ8N292 157 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 PNKDQ8N490 385 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 OR51S1Q8NGJ8 323 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 Q9N2K0 584 aa14.9□□□□□ -0.02
HMGA1-201ENST00000311487 ZNF107Q9UII5 783 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-201ENST00000311487 POLR3KQ9Y2Y1 108 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-201ENST00000311487 CUBNO60494 3623 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 TRAV20A0A0B4J274 112 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 SMLR1H3BR10 107 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 HBZP02008 142 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 SULT1A3P0DMM9 295 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 SULT1A4P0DMN0 295 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 CXCL3P19876 107 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 ANXA7P20073 488 aaKnown RBP14.89□□□□□ -0.03
HMGA1-201ENST00000311487 OR10V1Q8NGI7 309 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 GINS4Q9BRT9 223 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 TMPRSS13Q9BYE2 586 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.89□□□□□ -0.03
HMGA1-201ENST00000311487 ZNRD1Q9P1U0 126 aa14.89□□□□□ -0.03
HMGA1-201ENST00000311487 KBTBD11-OT1A0A1B0GTJ5 212 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 C15orf65H3BRN8 121 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 RAB3DO95716 219 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 COX7A1P24310 79 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 PAX8Q06710 450 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 IGSF11Q5DX21 431 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 GLDNQ6ZMI3 551 aaPredicted RBP14.88□□□□□ -0.03
HMGA1-201ENST00000311487 OR52L2PQ8NGH6 319 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 SEC22CQ9BRL7 303 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 KCNIP1Q9NZI2 227 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 UBE2J1Q9Y385 318 aaPredicted RBP14.88□□□□□ -0.03
HMGA1-201ENST00000311487 AUP1Q9Y679 476 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 A0A1W2PPE3 182 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 SSNA1O43805 119 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 CA11O75493 328 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 CD74P04233 296 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 IL5P05113 134 aa14.88□□□□□ -0.03
HMGA1-201ENST00000311487 CGB3P0DN86 165 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms