RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 MGST3O14880 152 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 SCGB1D2O95969 90 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 MBPP02686 304 aaPredicted RBP17.76■□□□□ 0.43
ATG4D-201ENST00000309469 WNT2P09544 360 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 SFTPCP11686 197 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 OR52L2PQ8NGH6 319 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 OR52M1Q8NGK5 317 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 TOLLIPQ9H0E2 274 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 LSM5Q9Y4Y9 91 aaKnown RBP17.76■□□□□ 0.43
ATG4D-201ENST00000309469 DUXBA0A1W2PPF3 345 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 FAM90A27PA6NNH2 459 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 CD55P08174 381 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 TRAT1Q6PIZ9 186 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 RNASE6Q93091 150 aaKnown RBP17.76■□□□□ 0.43
ATG4D-201ENST00000309469 IL22RA2Q969J5 263 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 PHYHIPLQ96FC7 376 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 KCNS2Q9ULS6 477 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 PPP1R3CQ9UQK1 317 aa17.76■□□□□ 0.43
ATG4D-201ENST00000309469 CHD3Q12873 2000 aaKnown RBP17.75■□□□□ 0.43
ATG4D-201ENST00000309469 NKX2-6A6NCS4 301 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 SHISA9B4DS77 424 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 K7N7A8 449 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 CYB5R3P00387 301 aaPredicted RBP17.75■□□□□ 0.43
ATG4D-201ENST00000309469 ZNRF1Q8ND25 227 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 OR51H1Q8NH63 302 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 RBPMSQ93062 196 aaKnown RBP17.75■□□□□ 0.43
ATG4D-201ENST00000309469 ARL11Q969Q4 196 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 PLPPR2Q96GM1 343 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 CXorf58Q96LI9 332 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 DCTN5Q9BTE1 182 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 ZFP57Q9NU63 452 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 COQ3Q9NZJ6 369 aa17.75■□□□□ 0.43
ATG4D-201ENST00000309469 K7EPK0 472 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 TNFRSF1AP19438 455 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 SSTR5P35346 364 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 CCL8P80075 99 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 SNTB1Q13884 538 aaKnown RBP17.74■□□□□ 0.43
ATG4D-201ENST00000309469 LY6DQ14210 128 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 PDZD9Q8IXQ8 264 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 FAM71E2Q8N5Q1 922 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 SLC25A32Q9H2D1 315 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 MED9Q9NWA0 146 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 ODAMA1E959 279 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 C15orf65H3BRN8 121 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 HKR1P10072 659 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 IRF2P14316 349 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 GNMTQ14749 295 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 AANATQ16613 207 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 TOR2AQ5JU69 321 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 FAM53AQ6NSI3 398 aaPredicted RBP17.74■□□□□ 0.43
ATG4D-201ENST00000309469 DMRTC2Q8IXT2 367 aaPredicted RBP17.74■□□□□ 0.43
ATG4D-201ENST00000309469 OR4D5Q8NGN0 318 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 NINJ1Q92982 152 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 NDRG3Q9UGV2 375 aa17.74■□□□□ 0.43
ATG4D-201ENST00000309469 E7EQL1 145 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 SPINT2O43291 252 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 GZMHP20718 246 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 VDAC1P21796 283 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 ADORA2A-AS1P86434 159 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 TLE1Q04724 770 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 STUMQ69YW2 141 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 ZNF561Q8N587 486 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 DRAM1Q8N682 238 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 STOML3Q8TAV4 291 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 C17orf50Q8WW18 174 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 SPIN2AQ99865 258 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 SPIN2BQ9BPZ2 258 aa17.73■□□□□ 0.43
ATG4D-201ENST00000309469 ST8SIA3O43173 380 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 SERPINE2P07093 398 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 P2RX3P56373 397 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 CR1LQ2VPA4 569 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 NMSQ5H8A3 153 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 ZCCHC24Q8N2G6 241 aaKnown RBP17.72■□□□□ 0.43
ATG4D-201ENST00000309469 GALNT11Q8NCW6 608 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 RFESDQ8TAC1 157 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 LINC01560Q8TB33 94 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 SDSLQ96GA7 329 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 OR2S2Q9NQN1 319 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 CYTL1Q9NRR1 136 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 PFDN2Q9UHV9 154 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 PIGBOS1A0A0B4J2F0 54 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 MEX3AA1L020 520 aaKnown RBP17.72■□□□□ 0.43
ATG4D-201ENST00000309469 E5RGE8 158 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 I3L521 148 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 ADAM20O43506 726 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 RPL12P30050 165 aaKnown RBP17.72■□□□□ 0.43
ATG4D-201ENST00000309469 PPP1CCP36873 323 aaKnown RBP17.72■□□□□ 0.43
ATG4D-201ENST00000309469 HTD2P86397 168 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 FAM74A1Q5RGS3 127 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 TGIF2LYQ8IUE0 185 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 ZNF645Q8N7E2 425 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 ZBTB34Q8NCN2 500 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 DEFB108BQ8NET1 73 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 MARVELD3Q96A59 401 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 RNF150Q9ULK6 438 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 NSG2Q9Y328 171 aa17.72■□□□□ 0.43
ATG4D-201ENST00000309469 CLEC18AA5D8T8 446 aa17.71■□□□□ 0.43
ATG4D-201ENST00000309469 CD3EP07766 207 aa17.71■□□□□ 0.43
ATG4D-201ENST00000309469 TPT1P13693 172 aaKnown RBP17.71■□□□□ 0.43
ATG4D-201ENST00000309469 CLEC18CQ8NCF0 446 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms