RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 SRPXP78539 464 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 RPL7L1Q6DKI1 246 aaKnown RBP5.48□□□□□ -1.53
USP47-201ENST00000305481 OR5D13Q8NGL4 314 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 ERGIC1Q969X5 290 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 MEGF10Q96KG7 1140 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 GLS2Q9UI32 602 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 RCL1Q9Y2P8 373 aaKnown RBP5.48□□□□□ -1.53
USP47-201ENST00000305481 CACNA1DQ01668 2161 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 CLEC18AA5D8T8 446 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 C16orf97H3BN30 126 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 ADAM20O43506 726 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 OR8U9P0C7N5 309 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 FAM157CP0CG43 387 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 TPT1P13693 172 aaKnown RBP5.48□□□□□ -1.53
USP47-201ENST00000305481 NUP62P37198 522 aaPredicted RBP5.48□□□□□ -1.53
USP47-201ENST00000305481 GNMTQ14749 295 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 CXorf66Q5JRM2 361 aaPredicted RBP5.48□□□□□ -1.53
USP47-201ENST00000305481 MOGAT3Q86VF5 341 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 CLEC18CQ8NCF0 446 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 OR13A1Q8NGR1 328 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 OR8U1Q8NH10 309 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 OR51H1Q8NH63 302 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 TMED6Q8WW62 240 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 DCTN5Q9BTE1 182 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 ELOVL5Q9NYP7 299 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 PPP1R3CQ9UQK1 317 aa5.48□□□□□ -1.53
USP47-201ENST00000305481 IGHV3OR15-7A0A075B7D8 119 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 DPRXA6NFQ7 191 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 A8MXK9 166 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 HSPA12AO43301 675 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 FGF16O43320 207 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 IGKV1-39P01597 117 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 HBZP02008 142 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 IGKV1D-39P04432 117 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 FGF2P09038 288 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 WNT2P09544 360 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 TMPRSS3P57727 454 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 MZT1Q08AG7 82 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 KRBOX4Q5JUW0 171 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 FAM201AQ5SY85 155 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 BOLLQ8N9W6 283 aaKnown RBP5.47□□□□□ -1.53
USP47-201ENST00000305481 OR52L2PQ8NGH6 319 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 OR10Z1Q8NGY1 313 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 MRGPRDQ8TDS7 321 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 ITLN1Q8WWA0 313 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 MARC2Q969Z3 335 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 C5orf30Q96GV9 206 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 PLA2G2EQ9NZK7 142 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 FBXL17Q9UF56 701 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 POMT1Q9Y6A1 747 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 OOEPA6NGQ2 149 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 E5RGE8 158 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 LGALS8O00214 317 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 ATXN7O15265 892 aaPredicted RBP5.47□□□□□ -1.53
USP47-201ENST00000305481 ST8SIA3O43173 380 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 SSTR5P35346 364 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 GABRA2P47869 451 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 PAX5Q02548 391 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 SMCO1Q147U7 214 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 ZNF585BQ52M93 769 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 FAM209BQ5JX69 171 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 DRAM1Q8N682 238 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 ANGPTL6Q8NI99 470 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 GALMQ96C23 342 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 NARFLQ9H6Q4 476 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 PLEKHA2Q9HB19 425 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 WFDC1Q9HC57 220 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 OR2S2Q9NQN1 319 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 NSG2Q9Y328 171 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 C15orf65H3BRN8 121 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 TAAR5O14804 337 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 IGHV1-46P01743 117 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 VDAC1P21796 283 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 IZUMO4Q1ZYL8 232 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 Q6ZRM9 215 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 WFDC8Q8IUA0 241 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 TGIF2LYQ8IUE0 185 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 NUP37Q8NFH4 326 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 IL22RA2Q969J5 263 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 LINC00052Q96N35 136 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 SMIM3Q9BZL3 60 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 TOLLIPQ9H0E2 274 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 ESRP2Q9H6T0 727 aaKnown RBP5.47□□□□□ -1.53
USP47-201ENST00000305481 GCM1Q9NP62 436 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 KCNIP1Q9NZI2 227 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 RNF150Q9ULK6 438 aa5.47□□□□□ -1.53
USP47-201ENST00000305481 ATRXP46100 2492 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 DUXBA0A1W2PPF3 345 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 SHOXO15266 292 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 TMEM50AO95807 157 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 GATA4P43694 442 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 P2RY1P47900 373 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 ID3Q02535 119 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 NHLH2Q02577 135 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 EIF4EBP1Q13541 118 aaPredicted RBP5.46□□□□□ -1.53
USP47-201ENST00000305481 HSD17B13Q7Z5P4 300 aaPredicted RBP5.46□□□□□ -1.53
USP47-201ENST00000305481 FAM90A1Q86YD7 464 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 ODF3L1Q8IXM7 274 aa5.46□□□□□ -1.53
USP47-201ENST00000305481 EIF4E3Q8N5X7 224 aaKnown RBP5.46□□□□□ -1.53
USP47-201ENST00000305481 ZNRF1Q8ND25 227 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms