RNA–Protein interactions for RNA: ENST00000304778.11

LONRF3-201, Transcript of LON peptidase N-terminal domain and ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene LONRF3, Length 2,989 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3-201ENST00000304778 TECTBQ96PL2 329 aa13.81□□□□□ -0.2
LONRF3-201ENST00000304778 ZNF442Q9H7R0 627 aa13.81□□□□□ -0.2
LONRF3-201ENST00000304778 PPYP01298 95 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 OR4A8P0C604 315 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 PLA2G5P39877 138 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 TUSC5Q8IXB3 177 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 MDS2Q8NDY4 140 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 PIGCQ92535 297 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 IGKV3D-15A0A087WSY6 115 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 DAZAP2Q15038 168 aaPredicted RBP13.8□□□□□ -0.2
LONRF3-201ENST00000304778 MEX3BQ6ZN04 569 aaKnown RBP13.8□□□□□ -0.2
LONRF3-201ENST00000304778 BOD1Q96IK1 185 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 SPAARA0A1B0GVQ0 90 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 GNMTQ14749 295 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 ICAM4Q14773 271 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 CALHM1Q8IU99 346 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 ZNF611Q8N823 705 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 OR2G3Q8NGZ4 309 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 CALHM2Q9HA72 323 aa13.8□□□□□ -0.2
LONRF3-201ENST00000304778 KLF13Q9Y2Y9 288 aaPredicted RBP13.8□□□□□ -0.2
LONRF3-201ENST00000304778 OR7C1O76099 320 aaPredicted RBP13.79□□□□□ -0.2
LONRF3-201ENST00000304778 SYNGR4O95473 234 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 SRPXP78539 464 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 EWSR1Q01844 656 aaKnown RBP eCLIP13.79□□□□□ -0.2
LONRF3-201ENST00000304778 HNF4GQ14541 408 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 C3AR1Q16581 482 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 OR1P1Q8NH06 330 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 OR4X1Q8NH49 305 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 SLC7A10Q9NS82 523 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 ZNF407Q9C0G0 2248 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 C3orf85A0A1B0GTC6 90 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 MPPED1O15442 326 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 CDS2O95674 445 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 HLA-DRB3P79483 266 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 C9orf135Q5VTT2 229 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 SLC35E3Q7Z769 313 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 SNIP1Q8TAD8 396 aaKnown RBP13.79□□□□□ -0.2
LONRF3-201ENST00000304778 C11orf1Q9H5F2 150 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 KIAA1456Q9P272 454 aa13.79□□□□□ -0.2
LONRF3-201ENST00000304778 FAM24AA6NFZ4 105 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 KLRC4-KLRK1H3BQV0 150 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 GCGP01275 180 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 FTH1P19P0C7X4 201 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 GNG10P50151 68 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 ALKBH2Q6NS38 261 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 ZNF880Q6PDB4 577 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.78□□□□□ -0.2
LONRF3-201ENST00000304778 FAM185AQ8N0U4 392 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 SPSB4Q96A44 273 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 TMEM222Q9H0R3 208 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 MAGT1Q9H0U3 335 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 PLSCR2Q9NRY7 297 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 PAX5Q02548 391 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 TEX38Q6PEX7 206 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 SLC25A26Q70HW3 274 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 PRRG4Q9BZD6 226 aa13.78□□□□□ -0.2
LONRF3-201ENST00000304778 RIMS4Q9H426 269 aaPredicted RBP13.78□□□□□ -0.2
LONRF3-201ENST00000304778 TRDCB7Z8K6 153 aa13.77□□□□□ -0.2
LONRF3-201ENST00000304778 NPBWR2P48146 333 aa13.77□□□□□ -0.2
LONRF3-201ENST00000304778 TLE1Q04724 770 aa13.77□□□□□ -0.2
LONRF3-201ENST00000304778 OR2C3Q8N628 320 aa13.77□□□□□ -0.2
LONRF3-201ENST00000304778 C1QTNF5Q9BXJ0 243 aa13.77□□□□□ -0.2
LONRF3-201ENST00000304778 NKX2-6A6NCS4 301 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 CLDN34H7C241 214 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 ARF1P84077 181 aaKnown RBP13.77□□□□□ -0.21
LONRF3-201ENST00000304778 RUNX1Q01196 453 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 COL10A1Q03692 680 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 DIDO1Q9BTC0 2240 aaKnown RBP13.77□□□□□ -0.21
LONRF3-201ENST00000304778 PRDM14Q9GZV8 571 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 TGOLN2O43493 480 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 CD46P15529 392 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 GNRHRP30968 328 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 FOXG1P55316 489 aaPredicted RBP13.77□□□□□ -0.21
LONRF3-201ENST00000304778 SRSF6Q13247 344 aaKnown RBP13.77□□□□□ -0.21
LONRF3-201ENST00000304778 ZNF266Q14584 549 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 Q6ZS49 121 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 VASH2Q86V25 355 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 CPEB3Q8NE35 698 aaKnown RBP13.77□□□□□ -0.21
LONRF3-201ENST00000304778 Q8NFD4 153 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 LINC00470Q9BZP3 86 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 DEFB127Q9H1M4 99 aa13.77□□□□□ -0.21
LONRF3-201ENST00000304778 A0A096LPE4 126 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 A0A1W2PPZ6 126 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A10PA6NDY2 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A18PA6NE21 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A16PA6NEW6 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A20PA6NIJ5 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A8PA6NJQ4 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A7PA6NKC0 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A22PA8MWA6 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A12PA8MX19 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A5PA8MXJ8 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A23PA8MXZ1 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 TK1P04183 234 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 HSPB1P04792 205 aaKnown RBP13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A15PP0C7V4 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A13PP0C7W8 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A14PP0C7W9 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 FAM90A24PP0C7X0 464 aa13.76□□□□□ -0.21
LONRF3-201ENST00000304778 ATP6V0CP27449 155 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms