RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 GAFA1Q96PS6 74 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 CHST6Q9GZX3 395 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 MMP28Q9H239 520 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 C12orf4Q9NQ89 552 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 IFT46Q9NQC8 304 aa13.16□□□□□ -0.3
SRGAP2C-201ENST00000304465 NAP1L6A6NFF2 107 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 RAB3DO95716 219 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 CRYBA1P05813 215 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 SELLP14151 372 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 OR3A1P47881 315 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 PAN3Q58A45 887 aaKnown RBP13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 ZNF497Q6ZNH5 498 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 Q6ZS49 121 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 PDZD9Q8IXQ8 264 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 KIR3DL3Q8N743 410 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 BEST4Q8NFU0 473 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 OR56B4Q8NH76 319 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 ST6GALNAC5Q9BVH7 336 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 TNFRSF19Q9NS68 423 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 FAM96BQ9Y3D0 163 aa13.15□□□□□ -0.3
SRGAP2C-201ENST00000304465 FAM240BA0A1B0GVZ2 78 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 CENPXA8MT69 81 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 TBPP20226 339 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 HRH1P35367 487 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 COL10A1Q03692 680 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 RBM39Q14498 530 aaKnown RBP13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 SRSF7Q16629 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 Q6YL49 198 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 OR4K15Q8NH41 348 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 C8orf46Q8TAG6 207 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 ENKURQ8TC29 256 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 PPA2Q9H2U2 334 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 Q9N2K0 584 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 ETAA1Q9NY74 926 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 MAB21L2Q9Y586 359 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 KIAA2026Q5HYC2 2103 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 DSCAML1Q8TD84 2053 aa13.14□□□□□ -0.31
SRGAP2C-201ENST00000304465 PAX5Q02548 391 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 VAX1Q5SQQ9 334 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 RSBN1Q5VWQ0 802 aaPredicted RBP13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 C5orf24Q7Z6I8 188 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 ZNRF1Q8ND25 227 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 SSMEM1Q8WWF3 244 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 MRGPRFQ96AM1 343 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 SDSLQ96GA7 329 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 COQ2Q96H96 371 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 MARVELD1Q9BSK0 173 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 PRDM13Q9H4Q3 707 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 SIRT7Q9NRC8 400 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 GLS2Q9UI32 602 aa13.13□□□□□ -0.31
SRGAP2C-201ENST00000304465 PMP2P02689 132 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 TCRBP04435 133 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 FAM185AQ8N0U4 392 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 TMEM86BQ8N661 226 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 OR5AP2Q8NGF4 316 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 OR51S1Q8NGJ8 323 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 NEK7Q8TDX7 302 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 RIMS4Q9H426 269 aaPredicted RBP13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 MCUBQ9NWR8 336 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 SLC2A8Q9NY64 477 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 ANXA10Q9UJ72 324 aa13.12□□□□□ -0.31
SRGAP2C-201ENST00000304465 TRBV23-1A0A0A0MS06 115 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 A0A0B4J293 547 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 A0A1W2PPH5 198 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 POM121CA8CG34 1229 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 M0R1W7 72 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 CSN2P05814 226 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 FAUP35544 74 aaKnown RBP13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 MEF2DQ14814 521 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 ATXN7L3Q14CW9 347 aaPredicted RBP13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 ACTBL2Q562R1 376 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 RNASE10Q5GAN6 216 aaKnown RBP13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 OVCH2Q7RTZ1 564 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 ZNF561Q8N587 486 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 OR13C8Q8NGS7 320 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 DPAGT1Q9H3H5 408 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 METTL8Q9H825 291 aaKnown RBP13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 POMT1Q9Y6A1 747 aa13.11□□□□□ -0.31
SRGAP2C-201ENST00000304465 A0A0U1RQK1 487 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 BTBD17A6NE02 478 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 K7N7A8 449 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 NDUFB6O95139 128 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 AMY2AP04746 511 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 RCC1P18754 421 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 KCNJ3P48549 501 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 MRPS15P82914 257 aaKnown RBP13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 NCR3LG1Q68D85 454 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 ZNF660Q6AZW8 331 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 SLC35E4Q6ICL7 350 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 ZNF782Q6ZMW2 699 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 C1orf122Q6ZSJ8 110 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 SGMS2Q8NHU3 365 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 SNX22Q96L94 193 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 MBNL3Q9NUK0 354 aaKnown RBP13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 COPZ2Q9P299 210 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 TRAV39A0A0B4J263 110 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 IGKV1-6A0A0C4DH72 117 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 FAM181BA6NEQ2 426 aa13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 SDCBPO00560 298 aaPredicted RBP13.1□□□□□ -0.31
SRGAP2C-201ENST00000304465 FBP1P09467 338 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms