RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 POLR2AP24928 1970 aaKnown RBP12.11□□□□□ -0.47
PRKCB-201ENST00000303531 LTBP4Q8N2S1 1624 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 CEP290O15078 2479 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 M0R143 59 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 TMEM116Q8NCL8 245 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 OR5AU1Q8NGC0 362 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 J3QR06 171 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 GREM1O60565 184 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 CEACAM21Q3KPI0 293 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 POM121Q96HA1 1249 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 WNT5AP41221 380 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 RPL30P62888 115 aaKnown RBP12.11□□□□□ -0.47
PRKCB-201ENST00000303531 TUSC1Q2TAM9 212 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 OR1L8Q8NGR8 309 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 OR51B2Q9Y5P1 312 aa12.11□□□□□ -0.47
PRKCB-201ENST00000303531 SNURFLB1AK76 121 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 ORM1P02763 201 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 SIGLEC14Q08ET2 396 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 TPRX1Q8N7U7 411 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 COL5A3P25940 1745 aaPredicted RBP12.1□□□□□ -0.47
PRKCB-201ENST00000303531 FAM74A7A6NL05 159 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 C4orf51C9J302 202 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 REG1BP48304 166 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 NAAAQ02083 359 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 RIGQ13278 110 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 GABRA6Q16445 453 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 LRRC75AQ8NAA5 344 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 TMEM204Q9BSN7 226 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 WIPI2Q9Y4P8 454 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 ZNHIT1O43257 154 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 DEDDO75618 318 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 OR2D3Q8NGH3 330 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 SPAARA0A1B0GVQ0 90 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 LMX1BO60663 402 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 NFAM1Q8NET5 270 aaPredicted RBP12.1□□□□□ -0.47
PRKCB-201ENST00000303531 TMUB1Q9BVT8 246 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 MYO16Q9Y6X6 1858 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 J3KRW8 73 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 MUC1P15941 1255 aaPredicted RBP12.1□□□□□ -0.47
PRKCB-201ENST00000303531 PRDX2P32119 198 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 ROM1Q03395 351 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 DOLPP1Q86YN1 238 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 OR8I2Q8N0Y5 310 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 Q8WTZ3 238 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 MAP1LC3CQ9BXW4 147 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 PPOXP50336 477 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 ZNF383Q8NA42 475 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 KCNK17Q96T54 332 aa12.1□□□□□ -0.47
PRKCB-201ENST00000303531 IGHV1-45A0A0A0MS14 117 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 CLDN14O95500 239 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 ADAMTS17Q8TE56 1095 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 SLC25A38Q96DW6 304 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 C1RLQ9NZP8 487 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 HOXA6P31267 233 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 DHRS11Q6UWP2 260 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 IGHV3-21A0A0B4J1V1 117 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 SMPD2O60906 423 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 RPL7P18124 248 aaKnown RBP12.09□□□□□ -0.47
PRKCB-201ENST00000303531 FGF12P61328 243 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 C16orf82Q7Z2V1 217 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 H1FOOQ8IZA3 346 aaPredicted RBP12.09□□□□□ -0.47
PRKCB-201ENST00000303531 LILRB1Q8NHL6 650 aaPredicted RBP12.09□□□□□ -0.47
PRKCB-201ENST00000303531 FAM222BQ8WU58 562 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 NRIP2Q9BQI9 281 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 MS4A5Q9H3V2 200 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 IGLV1-36A0A0B4J1U3 117 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 LDLRAD3Q86YD5 345 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 CYB561D1Q8N8Q1 229 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 SLC25A10Q9UBX3 287 aaPredicted RBP12.09□□□□□ -0.47
PRKCB-201ENST00000303531 COL4A5P29400 1685 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 SEMA7AO75326 666 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 CD1BP29016 333 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 SULT1A2P50226 295 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 TEX30Q5JUR7 227 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 CD200R1LQ6Q8B3 271 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 HEXA-AS1Q9H8Q6 139 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 MIOXQ9UGB7 285 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 TUBGCP6Q96RT7 1819 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 NMBP08949 121 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 BCL2P10415 239 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 KCNE5Q9UJ90 142 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 TDRD15B5MCY1 1934 aaKnown RBP12.09□□□□□ -0.47
PRKCB-201ENST00000303531 STRCP1A6NGW2 1772 aa12.09□□□□□ -0.47
PRKCB-201ENST00000303531 C16orf97H3BN30 126 aa12.08□□□□□ -0.47
PRKCB-201ENST00000303531 CD82P27701 267 aa12.08□□□□□ -0.47
PRKCB-201ENST00000303531 UBTD1Q9HAC8 227 aa12.08□□□□□ -0.47
PRKCB-201ENST00000303531 PITPNC1Q9UKF7 332 aa12.08□□□□□ -0.47
PRKCB-201ENST00000303531 APCSP02743 223 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 CD40P25942 277 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 UBE2V2Q15819 145 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 OR5R1Q8NH85 324 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 LHFPL5Q8TAF8 219 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 RPL31P62899 125 aaKnown RBP12.08□□□□□ -0.48
PRKCB-201ENST00000303531 GUCA2BQ16661 112 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 STXBP6Q8NFX7 210 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 GPR132Q9UNW8 380 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 HPRT1P00492 218 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 SCTP09683 121 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 ISG15P05161 165 aa12.08□□□□□ -0.48
PRKCB-201ENST00000303531 EIF4E3Q8N5X7 224 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms