RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SH2D2AQ9NP31 389 aa11.53□□□□□ -0.56
CTDP1-202ENST00000299543 TNRC18O15417 2968 aaPredicted RBP11.52□□□□□ -0.56
CTDP1-202ENST00000299543 CNOT1A5YKK6 2376 aaKnown RBP11.52□□□□□ -0.56
CTDP1-202ENST00000299543 TRAPPC2LH3BP13 241 aa11.52□□□□□ -0.56
CTDP1-202ENST00000299543 DANCRP0C864 163 aa11.52□□□□□ -0.56
CTDP1-202ENST00000299543 RUNX1Q01196 453 aa11.52□□□□□ -0.56
CTDP1-202ENST00000299543 LOXL2Q9Y4K0 774 aa11.52□□□□□ -0.56
CTDP1-202ENST00000299543 IGKV1D-13A0A0B4J2D9 117 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 SIAH2O43255 324 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 SYNGR1O43759 233 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 IGKV1-13P0DP09 117 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 PLGLB1Q02325 96 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 PAX5Q02548 391 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 ZFP36L1Q07352 338 aaKnown RBP11.52□□□□□ -0.57
CTDP1-202ENST00000299543 ZNF818PQ6ZRF7 136 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 OR5C1Q8NGR4 320 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 RAB24Q969Q5 203 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 C18orf12Q96KH6 178 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 CEP250Q9BV73 2442 aa11.52□□□□□ -0.57
CTDP1-202ENST00000299543 XKRY2A2RUG3 117 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 ZFP92A6NM28 416 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 RAB4AP20338 218 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 WNT5AP41221 380 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 UCP3P55916 312 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 JOSD1Q15040 202 aaPredicted RBP11.51□□□□□ -0.57
CTDP1-202ENST00000299543 P2RY6Q15077 328 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 ZNF66Q6ZN08 573 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 MKXQ8IYA7 352 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 ICE1Q9Y2F5 2266 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 DSPP15924 2871 aaKnown RBP11.51□□□□□ -0.57
CTDP1-202ENST00000299543 SEC11BP0C7V7 166 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 EIF3IQ13347 325 aaKnown RBP11.51□□□□□ -0.57
CTDP1-202ENST00000299543 GPR157Q5UAW9 335 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 C6orf15Q6UXA7 325 aaPredicted RBP11.51□□□□□ -0.57
CTDP1-202ENST00000299543 C1orf87Q8N0U7 546 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 TMED3Q9Y3Q3 217 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 NTN3O00634 580 aaPredicted RBP11.51□□□□□ -0.57
CTDP1-202ENST00000299543 ATP6V0CP27449 155 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 PLA2G5P39877 138 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 HERPUD1Q15011 391 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 MAJINQ3KP22 176 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 ABHD17BQ5VST6 288 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 TMEM42Q69YG0 159 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 TMEM211Q6ICI0 200 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 MYPOPQ86VE0 399 aaPredicted RBP11.51□□□□□ -0.57
CTDP1-202ENST00000299543 MCEMP1Q8IX19 187 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 SIGLEC12Q96PQ1 595 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 DECR2Q9NUI1 292 aa11.51□□□□□ -0.57
CTDP1-202ENST00000299543 A0A1B0GUS0 222 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 IGSF23A1L1A6 192 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 CER1O95813 267 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 CD55P08174 381 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 MAGEA5P43359 124 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 RPL23AP62750 156 aaKnown RBP11.5□□□□□ -0.57
CTDP1-202ENST00000299543 IL13RA2Q14627 380 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 ZNF100Q8IYN0 542 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 ZNF552Q9H707 407 aaPredicted RBP11.5□□□□□ -0.57
CTDP1-202ENST00000299543 MRPS18CQ9Y3D5 142 aaKnown RBP11.5□□□□□ -0.57
CTDP1-202ENST00000299543 NCKAP5O14513 1909 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 A0A1W2PR80 420 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 SYNGR4O95473 234 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 IRF2P14316 349 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 OR3A1P47881 315 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 SSPNQ14714 243 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 WDR5BQ86VZ2 330 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 MTCH1Q9NZJ7 389 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 BOKQ9UMX3 212 aaPredicted RBP11.5□□□□□ -0.57
CTDP1-202ENST00000299543 LAMP3Q9UQV4 416 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 POMT1Q9Y6A1 747 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 WSB1Q9Y6I7 421 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 TRDCB7Z8K6 153 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 LOC400499M0QZD8 3231 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 CHST1O43916 411 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 LMO1P25800 156 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 ZNF154Q13106 437 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 OR8B8Q15620 311 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 Q6ZVH6 145 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 ZDHHC23Q8IYP9 409 aa11.5□□□□□ -0.57
CTDP1-202ENST00000299543 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
CTDP1-202ENST00000299543 ZNF503-AS2A6NEH8 195 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 RPLP1P05386 114 aaKnown RBP11.49□□□□□ -0.57
CTDP1-202ENST00000299543 DYNLT3P51808 116 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 ERVS71-1P61550 626 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 OR5R1Q8NH85 324 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 PSMF1Q92530 271 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 NOL4LQ96MY1 436 aaPredicted RBP11.49□□□□□ -0.57
CTDP1-202ENST00000299543 TMEM222Q9H0R3 208 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 RNF24Q9Y225 148 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 GVINP1Q7Z2Y8 2422 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 RBFOX3A6NFN3 312 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 LILRA1O75019 489 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 ZXDAP98168 799 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 PLP2Q04941 152 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 CMTM1Q8IZ96 169 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 BOD1Q96IK1 185 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 ADGRG7Q96K78 797 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 GINS3Q9BRX5 216 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 GNG13Q9P2W3 67 aa11.49□□□□□ -0.57
CTDP1-202ENST00000299543 ERRFI1Q9UJM3 462 aaPredicted RBP11.49□□□□□ -0.57
CTDP1-202ENST00000299543 ASPMQ8IZT6 3477 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms