RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 KLF14Q8TD94 323 aaPredicted RBP13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 SFT2D1Q8WV19 159 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 PLEKHF2Q9H8W4 249 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 LRP5LA4QPB2 252 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 H0Y980 276 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 SNRNP70P08621 437 aaKnown RBP13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 RND3P61587 244 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 PRAMEF6Q5VXH4 476 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 TPRX1Q8N7U7 411 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 CD300LFQ8TDQ1 290 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 GPR146Q96CH1 333 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 ARV1Q9H2C2 271 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 RPS10P5Q9NQ39 176 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 TAAR3PQ9P1P4 343 aa13.38□□□□□ -0.27
NCKIPSD-201ENST00000294129 ACACAQ13085 2346 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 CEACAM6P40199 344 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 SLC25A24Q6NUK1 477 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 LYRM2Q9NU23 88 aaPredicted RBP13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 CACNG5Q9UF02 275 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 POLDIP2Q9Y2S7 368 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 PLCE1Q9P212 2302 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 PRSS44E7EML9 344 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 CBR1P16152 277 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 SNRPEP62304 92 aaKnown RBP13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 GABRA6Q16445 453 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 Q6ZRM9 215 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 LINC00596Q86U02 117 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 OR5D13Q8NGL4 314 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 POM121Q96HA1 1249 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 CLCF1Q9UBD9 225 aa13.37□□□□□ -0.27
NCKIPSD-201ENST00000294129 AKAP13Q12802 2813 aa13.36□□□□□ -0.27
NCKIPSD-201ENST00000294129 PSPNO60542 156 aa13.36□□□□□ -0.27
NCKIPSD-201ENST00000294129 ZNF266Q14584 549 aa13.36□□□□□ -0.27
NCKIPSD-201ENST00000294129 TESK1Q15569 626 aa13.36□□□□□ -0.27
NCKIPSD-201ENST00000294129 ZNF808Q8N4W9 903 aaPredicted RBP13.36□□□□□ -0.27
NCKIPSD-201ENST00000294129 RARRES2Q99969 163 aa13.36□□□□□ -0.27
NCKIPSD-201ENST00000294129 SLC25A31Q9H0C2 315 aa13.36□□□□□ -0.27
NCKIPSD-201ENST00000294129 AESQ08117 197 aa13.36□□□□□ -0.27
NCKIPSD-201ENST00000294129 SRSF7Q16629 238 aaKnown RBP eCLIP13.36□□□□□ -0.27
NCKIPSD-201ENST00000294129 COLCA2A8K830 154 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 SH2D1BO14796 132 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 TIMM8AO60220 97 aaPredicted RBP13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 EIF3GO75821 320 aaKnown RBP eCLIP13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 CCL20P78556 96 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 C14orf79Q96F83 325 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 FAM157AC9JC47 383 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 HAND1O96004 215 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 KIR2DL2P43627 348 aaPredicted RBP13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 ID3Q02535 119 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 LTC4SQ16873 150 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 ZNF497Q6ZNH5 498 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 Q6ZT83 130 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 ODF3L1Q8IXM7 274 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 OR1L1Q8NH94 360 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 ISOC2Q96AB3 205 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 PLPPR2Q96GM1 343 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 CLCC1Q96S66 551 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 OPN3Q9H1Y3 402 aaPredicted RBP13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 C11orf1Q9H5F2 150 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 CHD3Q12873 2000 aaKnown RBP13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 MLNRO43193 412 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 TXNL1O43396 289 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 PITX3O75364 302 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 PGA5P0DJD9 388 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 OR3A1P47881 315 aa13.35□□□□□ -0.27
NCKIPSD-201ENST00000294129 ZNF292O60281 2723 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 IGKV1-39P01597 117 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 IGKV1D-39P04432 117 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 HEXAP06865 529 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 RAC2P15153 192 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 HAGHQ16775 308 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 ATMQ13315 3056 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 IGLV2-14P01704 120 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 METTL15P1P0C7V9 234 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 AWAT1Q58HT5 328 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 ZNF880Q6PDB4 577 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 ASCL3Q9NQ33 180 aa13.34□□□□□ -0.27
NCKIPSD-201ENST00000294129 IGHV3-43A0A0B4J1X8 118 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 UMAD1C9J7I0 102 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 IGHV3-43DP0DP04 118 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 GABRA2P47869 451 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 HABP2Q14520 560 aaPredicted RBP13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 OR52L2PQ8NGH6 319 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 LYPD6BQ8NI32 183 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 RFESDQ8TAC1 157 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 GTF3AQ92664 365 aaKnown RBP13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 CABLES2Q9BTV7 478 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 DCHS1Q96JQ0 3298 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 K7N7A8 449 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 ACAA1P09110 424 aaPredicted RBP13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 CECR9P0C854 216 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 PAX9P55771 341 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 ERVK11-1P61568 191 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 RBMS3Q6XE24 437 aaKnown RBP13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 THNSL2Q86YJ6 484 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 ZNF610Q8N9Z0 462 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 NANPQ8TBE9 248 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 MRGPRDQ8TDS7 321 aa13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 SMG1Q96Q15 3661 aaKnown RBP13.33□□□□□ -0.28
NCKIPSD-201ENST00000294129 INO80CQ6PI98 192 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms