RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 ATP6V0CP27449 155 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 OPRK1P41145 380 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 UBE2L3P68036 154 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 TMEM211Q6ICI0 200 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZNF880Q6PDB4 577 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 PRR13Q9NZ81 148 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 A0A1W2PN81 502 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 PRRG2O14669 202 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 TNFRSF1AP19438 455 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 PCM1Q15154 2024 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 TBR1Q16650 682 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 MRPL30Q8TCC3 161 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 ASB10Q8WXI3 467 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 WBP1Q96G27 269 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 SRD5A3Q9H8P0 318 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 A0A1B0GU03 582 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 BCL3P20749 454 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 PAFAH1B2P68402 229 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 RNPS1Q15287 305 aaKnown RBP10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 FNDC7Q5VTL7 733 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 PPP1R32Q7Z5V6 425 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 HOGA1Q86XE5 327 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR13G1Q8NGZ3 307 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 RFESDQ8TAC1 157 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 CA5BP1Q8WTZ4 195 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 HS3ST3B1Q9Y662 390 aa10.33□□□□□ -0.76
SYNGAP1-201ENST00000293748 NCBP2LA6PVI3 153 aaKnown RBP10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 SP1P08047 785 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 VSIG10L2P0DP72 767 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZNF343Q6P1L6 599 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 SLC36A1Q7Z2H8 476 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 LYG1Q8N1E2 194 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR4S2Q8NH73 311 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 DTD1Q8TEA8 209 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 ADIPOR1Q96A54 375 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 VSTM2LQ96N03 204 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 MAP1LC3CQ9BXW4 147 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 M0R1B8 84 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 CDK2AP1O14519 115 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 SMIM10L1P0DMW3 83 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 B2MP61769 119 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 CD200R1LQ6Q8B3 271 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 ADAD2Q8NCV1 583 aaKnown RBP10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 KISS1RQ969F8 398 aaPredicted RBP10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 SMIM10Q96HG1 83 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 PAM16Q9Y3D7 125 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 CA6P23280 308 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 SERF2P84101 59 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 PSG6Q00889 435 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 C21orf62-AS1Q17RA5 79 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 VAX1Q5SQQ9 334 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZNF385CQ66K41 422 aaPredicted RBP10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 LYZL2Q7Z4W2 148 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 RNF133Q8WVZ7 376 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 VSIG4Q9Y279 399 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 C5orf42Q9H799 3197 aa10.32□□□□□ -0.76
SYNGAP1-201ENST00000293748 GCGP01275 180 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 HLA-DQB1P01920 261 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 CTSBP07858 339 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR3A1P47881 315 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 KLRB1Q12918 225 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 GGTLC2Q14390 218 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 WIPI1Q5MNZ9 446 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR1L6Q8NGR2 347 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 LILRB1Q8NHL6 650 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 TBX15Q96SF7 602 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 GPA33Q99795 319 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 IL36GQ9NZH8 169 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 BCL2P10415 239 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 TMEM255AQ5JRV8 349 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 DCAF12L2Q5VW00 463 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 GAPTQ8N292 157 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 SPRY4Q9C004 299 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 LPAR5Q9H1C0 372 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 SEBOXQ9HB31 216 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZNF71Q9NQZ8 489 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZNF785A8K8V0 405 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 SNURFLB1AK76 121 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 PAGE4O60829 102 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 ADAM11O75078 769 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 DPF1Q92782 380 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 AKIRIN1Q9H9L7 192 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 NKX2-6A6NCS4 301 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR2T8A6NH00 312 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 NDUFB3O43676 98 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 PITX3O75364 302 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 CA11O75493 328 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 CYB5R3P00387 301 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 F12P00748 615 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 CRYABP02511 175 aaKnown RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 TMIGD3P0DMS9 266 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 GALNSP34059 522 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 EFNB2P52799 333 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 RPS4XP62701 263 aaKnown RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 ZXDCQ2QGD7 858 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 LRRC10Q5BKY1 277 aa10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 GMPPAQ96IJ6 420 aaPredicted RBP10.31□□□□□ -0.76
SYNGAP1-201ENST00000293748 IGHV1-45A0A0A0MS14 117 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 TCL1AP56279 114 aa10.3□□□□□ -0.76
SYNGAP1-201ENST00000293748 OR1C1Q15619 314 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms