RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 EGLN1Q9GZT9 426 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 HIF1ANQ9NWT6 349 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 CHD3Q12873 2000 aaKnown RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 A0A0A6YYD4 124 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ZNF320A2RRD8 509 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ZNF98A6NK75 572 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ATXN7O15265 892 aaPredicted RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 CYB5R3P00387 301 aaPredicted RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 FABP4P15090 132 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ZNF17P17021 662 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 LGALS4P56470 323 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 PLAURQ03405 335 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 TEX30Q5JUR7 227 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ZNF705AQ6ZN79 300 aaPredicted RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 CARFQ8N187 725 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 DAZAP1Q96EP5 407 aaKnown RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 LYZL4Q96KX0 146 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 IP6K3Q96PC2 410 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 COMMD5Q9GZQ3 224 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 DCAF16Q9NXF7 216 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 TMED3Q9Y3Q3 217 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 PPIHO43447 177 aaKnown RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 ZNF737O75373 536 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 CTSDP07339 412 aaPredicted RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 OPRK1P41145 380 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 TCL1AP56279 114 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 SLC35B1P78383 322 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 H3F3AP84243 136 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 RTL8BQ17RB0 113 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 NCR3LG1Q68D85 454 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ASPHD2Q6ICH7 369 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 VWA1Q6PCB0 445 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 PUSL1Q8N0Z8 303 aaKnown RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 CORO2AQ92828 525 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 SLC25A28Q96A46 364 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 DCTN5Q9BTE1 182 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 RFNGQ9Y644 331 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 POMT1Q9Y6A1 747 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 WSB1Q9Y6I7 421 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 TMEM218A2RU14 115 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 H7BYZ3 331 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 OR2H2O95918 312 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 CTRB1P17538 263 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 MPPED2Q15777 294 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 FNDC7Q5VTL7 733 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 CTRB2Q6GPI1 263 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 SLC36A1Q7Z2H8 476 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 WDFY1Q8IWB7 410 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 NFAM1Q8NET5 270 aaPredicted RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 TP53RKQ96S44 253 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 LPAR3Q9UBY5 353 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ISG15P05161 165 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 ZNF818PQ6ZRF7 136 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 CPEB3Q8NE35 698 aaKnown RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 GNPNAT1Q96EK6 184 aaPredicted RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 CCL13Q99616 98 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 SF3B5Q9BWJ5 86 aaKnown RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 ACTR3CQ9C0K3 210 aaPredicted RBP4.12□□□□□ -1.75
UBR1-201ENST00000290650 NGBQ9NPG2 151 aa4.12□□□□□ -1.75
UBR1-201ENST00000290650 IGKV1D-8A0A087WSZ0 117 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 PPP5D1E7EU14 171 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 PPP1R2P9O14990 202 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 RBP4P02753 201 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 ORM2P19652 201 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 SSTR5P35346 364 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 CD200P41217 278 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 SRSF3P84103 164 aaKnown RBP4.11□□□□□ -1.75
UBR1-201ENST00000290650 OVCH2Q7RTZ1 564 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 OR10S1Q8NGN2 331 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 CYYR1Q96J86 154 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 EAF1Q96JC9 268 aaPredicted RBP4.11□□□□□ -1.75
UBR1-201ENST00000290650 NPDC1Q9NQX5 325 aaPredicted RBP4.11□□□□□ -1.75
UBR1-201ENST00000290650 ZNF835Q9Y2P0 537 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 NPTNQ9Y639 398 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 VPS13AQ96RL7 3174 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 MAP1LC3B2A6NCE7 125 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 ATP6V0CP27449 155 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 DHODHQ02127 395 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 ZNF90Q03938 601 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 HABP2Q14520 560 aaPredicted RBP4.11□□□□□ -1.75
UBR1-201ENST00000290650 BSCL2Q96G97 398 aaPredicted RBP4.11□□□□□ -1.75
UBR1-201ENST00000290650 OR2V2Q96R30 315 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 MAP1LC3BQ9GZQ8 125 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 IGKV3-7A0A075B6H7 116 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 TRAV20A0A0B4J274 112 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 SERTM2A0A1B0GWG4 89 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 RPL36A-HNRNPH2H7BZ11 118 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 GALR2O43603 387 aaPredicted RBP4.11□□□□□ -1.75
UBR1-201ENST00000290650 FGF2P09038 288 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 SPP1P10451 314 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 UCP2P55851 309 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 FABP9Q0Z7S8 132 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 IGKV1-9A0A0C4DH69 117 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 PLAUP00749 431 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 ERVFC1-1P60608 527 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 ZNRF1Q8ND25 227 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 TLNRD1Q9H1K6 362 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 CXXC4Q9H2H0 198 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 A0A0U1RQV5 110 aa4.11□□□□□ -1.75
UBR1-201ENST00000290650 RBFOX3A6NFN3 312 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 584.5 ms