RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 CD1AP06126 327 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 IGHV3-43DP0DP04 118 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 GTF2F2P13984 249 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 TMEM11P17152 192 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 FSTP19883 344 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 GZMHP20718 246 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 SOX6P35712 828 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 REG1BP48304 166 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 INSL4Q14641 139 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 MPV17LQ2QL34 196 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 GLIPR1L1Q6UWM5 242 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 C18orf65Q6ZTR6 163 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 C5orf24Q7Z6I8 188 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 LINC00596Q86U02 117 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 ZNF329Q86UD4 541 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 OR8H3Q8N146 312 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 TMEM104Q8NE00 496 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 OR10X1Q8NGY0 326 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 ARL11Q969Q4 196 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 TMEM203Q969S6 136 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 ST6GALNAC6Q969X2 333 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 KCTD7Q96MP8 289 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 NOL4LQ96MY1 436 aaPredicted RBP7.55□□□□□ -1.2
HMHB1-201ENST00000289448 DERL3Q96Q80 235 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 S100A13Q99584 98 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 SLIRPQ9GZT3 109 aaKnown RBP7.55□□□□□ -1.2
HMHB1-201ENST00000289448 BANF2Q9H503 90 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 AURKAIP1Q9NWT8 199 aaPredicted RBP7.55□□□□□ -1.2
HMHB1-201ENST00000289448 TXNL4BQ9NX01 149 aaKnown RBP7.55□□□□□ -1.2
HMHB1-201ENST00000289448 RCC2Q9P258 522 aaKnown RBP7.55□□□□□ -1.2
HMHB1-201ENST00000289448 LINC00527Q9UJ94 153 aa7.55□□□□□ -1.2
HMHB1-201ENST00000289448 MRPS28Q9Y2Q9 187 aaKnown RBP7.55□□□□□ -1.2
HMHB1-201ENST00000289448 IGHV1-3A0A0C4DH29 117 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 ZNF736B4DX44 427 aaPredicted RBP7.54□□□□□ -1.2
HMHB1-201ENST00000289448 C12orf77C9JDV5 145 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 AIPO00170 330 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 SDCBPO00560 298 aaPredicted RBP7.54□□□□□ -1.2
HMHB1-201ENST00000289448 HSD17B6O14756 317 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 ZNF780AO75290 641 aaPredicted RBP7.54□□□□□ -1.2
HMHB1-201ENST00000289448 MAS1P04201 325 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 RAB7AP51149 207 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 ZNF134P52741 427 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 FABP5Q01469 135 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 ZNF816Q0VGE8 651 aaPredicted RBP7.54□□□□□ -1.2
HMHB1-201ENST00000289448 EBI3Q14213 229 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 HES1Q14469 280 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 SIGIRRQ6IA17 410 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 C22orf42Q6IC83 251 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 MOB3BQ86TA1 216 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 JAGN1Q8N5M9 183 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 MS4A15Q8N5U1 240 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 LINC00311Q8N616 119 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 Q8N6K4 173 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 OR4X2Q8NGF9 303 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 OR52M1Q8NGK5 317 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 OR4K15Q8NH41 348 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 MCFD2Q8NI22 146 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 TMED9Q9BVK6 235 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 NXF2Q9GZY0 626 aaKnown RBP7.54□□□□□ -1.2
HMHB1-201ENST00000289448 RNF167Q9H6Y7 350 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 NECAP2Q9NVZ3 263 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 GFOD1Q9NXC2 390 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 CKLFQ9UBR5 152 aa7.54□□□□□ -1.2
HMHB1-201ENST00000289448 PSMB11A5LHX3 300 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 FGF16O43320 207 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 ORC5O43913 435 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 GAPDHP04406 335 aaKnown RBP7.53□□□□□ -1.2
HMHB1-201ENST00000289448 PF4V1P10720 104 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 RCC1P18754 421 aaPredicted RBP7.53□□□□□ -1.2
HMHB1-201ENST00000289448 CD33P20138 364 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 TGFBR1P36897 503 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 KRTAP10-11P60412 298 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 DCTN2Q13561 401 aaKnown RBP7.53□□□□□ -1.2
HMHB1-201ENST00000289448 CT45A1Q5HYN5 189 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 KHDC1LQ5JSQ8 128 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 FAM27D1Q5T7N8 215 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 RAB12Q6IQ22 244 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 REC114Q7Z4M0 266 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 GAPTQ8N292 157 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 C8orf31Q8N9H6 132 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 ZNF439Q8NDP4 499 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 OR10V1Q8NGI7 309 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 OR6Q1Q8NGQ2 317 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 OR1L1Q8NH94 360 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 CT45A3Q8NHU0 189 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 MRAPQ8TCY5 172 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 NEK7Q8TDX7 302 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 S100ZQ8WXG8 99 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 EAF1Q96JC9 268 aaPredicted RBP7.53□□□□□ -1.2
HMHB1-201ENST00000289448 SELENOIQ9C0D9 397 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 PLSCR3Q9NRY6 295 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 ETAA1Q9NY74 926 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 PEX16Q9Y5Y5 336 aa7.53□□□□□ -1.2
HMHB1-201ENST00000289448 A0A075B6Q4 140 aa7.52□□□□□ -1.21
HMHB1-201ENST00000289448 UBE2QL1A1L167 161 aa7.52□□□□□ -1.21
HMHB1-201ENST00000289448 SERPINE3A8MV23 424 aa7.52□□□□□ -1.21
HMHB1-201ENST00000289448 MCRIP1C9JLW8 97 aa7.52□□□□□ -1.21
HMHB1-201ENST00000289448 SC5DO75845 299 aa7.52□□□□□ -1.21
HMHB1-201ENST00000289448 IGHG2P01859 326 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms