RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ZNF600Q6ZNG1 722 aa13.34□□□□□ -0.27
SHROOM4-201ENST00000289292 APCDD1LQ8NCL9 501 aa13.34□□□□□ -0.27
SHROOM4-201ENST00000289292 ZPBPQ9BS86 351 aa13.34□□□□□ -0.27
SHROOM4-201ENST00000289292 DDA1Q9BW61 102 aa13.34□□□□□ -0.27
SHROOM4-201ENST00000289292 C5orf66Q9H5L9 145 aa13.34□□□□□ -0.27
SHROOM4-201ENST00000289292 GPR132Q9UNW8 380 aa13.34□□□□□ -0.27
SHROOM4-201ENST00000289292 CD1AP06126 327 aa13.34□□□□□ -0.27
SHROOM4-201ENST00000289292 HIST1H2BAQ96A08 127 aa13.34□□□□□ -0.27
SHROOM4-201ENST00000289292 POLR2AP24928 1970 aaKnown RBP13.33□□□□□ -0.27
SHROOM4-201ENST00000289292 ARID2Q68CP9 1835 aa13.33□□□□□ -0.27
SHROOM4-201ENST00000289292 LOC389332A0A1B0GUA5 103 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 KHDC3LQ587J8 217 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 LAMTOR1Q6IAA8 161 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 SLC35E4Q6ICL7 350 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 SSX8Q7RTT4 187 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 C10orf35Q96D05 121 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 GFRALQ6UXV0 394 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 SLC36A1Q7Z2H8 476 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 OR52L2PQ8NGH6 319 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 P01737 135 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 VAX1Q5SQQ9 334 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 CTXND1A0A1B0GTU2 59 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 CXorf1O96002 111 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 FSTP19883 344 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 SOX8P57073 446 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 SNAI3Q3KNW1 292 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 MUC15Q8N387 334 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 FAM216AQ8WUB2 273 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 RNF122Q9H9V4 155 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 F5H697 171 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 PLPPR5Q32ZL2 321 aa13.33□□□□□ -0.28
SHROOM4-201ENST00000289292 TRBV5-7A0A0A0MS05 114 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 TNFRSF1AP19438 455 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 SLC22A18ASQ8N1D0 253 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 SGMS2Q8NHU3 365 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 TMSB15BA0A087X1C1 80 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 NDUFB4O95168 129 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 EPHA8P29322 1005 aaPredicted RBP13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 BPIFA4PQ86YQ2 179 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 SLC25A40Q8TBP6 338 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 RHBDL1O75783 438 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 RPL7P18124 248 aaKnown RBP13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 HOXA6P31267 233 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 OR4A4PQ8NGN8 299 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 OR4X1Q8NH49 305 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 PTX4Q96A99 478 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 ATG101Q9BSB4 218 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 ZNF646O15015 1829 aaPredicted RBP13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 REG1BP48304 166 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 CEBPDP49716 269 aaPredicted RBP13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 COMPP49747 757 aaPredicted RBP13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 ATRAIDQ6UW56 229 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 TMEM252Q8N6L7 170 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 RND1Q92730 232 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 DMRT1Q9Y5R6 373 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 OTOFQ9HC10 1997 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 TAF1LQ8IZX4 1826 aa13.32□□□□□ -0.28
SHROOM4-201ENST00000289292 IGHV5-10-1A0A0J9YXX1 117 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 IFITM10A6NMD0 228 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 THY1P04216 161 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 COL10A1Q03692 680 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 GAB4Q2WGN9 574 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 PIKFYVEQ9Y2I7 2098 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 OR4C46A6NHA9 309 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 DXOO77932 396 aaKnown RBP13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 LIFP15018 202 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 GSN-AS1Q9NRJ2 163 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 DICER1Q9UPY3 1922 aaKnown RBP13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 C5orf52A6NGY3 159 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 MPTX1A8MV57 137 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 PSMB2P49721 201 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 C5orf17Q8NAS9 161 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 RAB24Q969Q5 203 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 GAL3ST2Q9H3Q3 398 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 OR6C3Q9NZP0 311 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 TRAV38-1A0A0B4J264 116 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 IZUMO4Q1ZYL8 232 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 C10orf113Q5VZT2 155 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 SF3B5Q9BWJ5 86 aaKnown RBP13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 A0A1W2PN81 502 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 ADRA2AP08913 450 aa13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 H1FOOQ8IZA3 346 aaPredicted RBP13.31□□□□□ -0.28
SHROOM4-201ENST00000289292 SOD3P08294 240 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 ABHD14BQ96IU4 210 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 OR4C12Q96R67 309 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 ASCL3Q9NQ33 180 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 CKAP5Q14008 2032 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 IGLV1-36A0A0B4J1U3 117 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 MT-CO3P00414 261 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 DEFB123Q8N688 67 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 GPX7Q96SL4 187 aaPredicted RBP13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 NPDC1Q9NQX5 325 aaPredicted RBP13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 A0A1W2PQF6 199 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 ERGP11308 486 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 PSG4Q00888 419 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 BHLHA15Q7RTS1 189 aaPredicted RBP13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 MDP1Q86V88 176 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 RBKSQ9H477 322 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 TRGC1P0CF51 173 aa13.3□□□□□ -0.28
SHROOM4-201ENST00000289292 COL8A1P27658 744 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms