RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 VSIRQ9H7M9 311 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 KCNIP1Q9NZI2 227 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 PRSS50Q9UI38 385 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 TCFL5Q9UL49 500 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 SLC22A20A6NK97 555 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 RPL36A-HNRNPH2H7BZ11 118 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 FOSL1P15407 271 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 FOXC1Q12948 553 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 IGFBP7Q16270 282 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.51□□□□□ -0.57
SCAF4-201ENST00000286835 LURAP1LQ8IV03 231 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 TMEM105Q8N8V8 129 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 C10orf35Q96D05 121 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 RBKSQ9H477 322 aa11.51□□□□□ -0.57
SCAF4-201ENST00000286835 FOXD3Q9UJU5 478 aaPredicted RBP11.51□□□□□ -0.57
SCAF4-201ENST00000286835 ELOA3CA0A087WX78 387 aaPredicted RBP11.5□□□□□ -0.57
SCAF4-201ENST00000286835 ZNF320A2RRD8 509 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 SYNGR1O43759 233 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 NXPH2O95156 264 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 RAB4BP61018 213 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 SLC38A11Q08AI6 406 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 ZNF574Q6ZN55 896 aaPredicted RBP11.5□□□□□ -0.57
SCAF4-201ENST00000286835 SLC35E3Q7Z769 313 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 PCGF1Q9BSM1 259 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 EGLN1Q9GZT9 426 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 CHCHD2Q9Y6H1 151 aaPredicted RBP11.5□□□□□ -0.57
SCAF4-201ENST00000286835 OPN1MWP04001 364 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 CTXN2P0C2S0 81 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 OPN1MW2P0DN77 364 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 OPN1MW3P0DN78 364 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 CA6P23280 308 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 PAX6P26367 422 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 RAC3P60763 192 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 OR4D5Q8NGN0 318 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 CLDND2Q8NHS1 167 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 FGFBP3Q8TAT2 258 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 CT55Q8WUE5 264 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 KLK10O43240 276 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 TGFBR3Q03167 851 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 RAB40CQ96S21 281 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 ANAPC10Q9UM13 185 aa11.5□□□□□ -0.57
SCAF4-201ENST00000286835 FAM157AC9JC47 383 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 CA11O75493 328 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 CRYAAP02489 173 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 EGR1P18146 543 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 F2RP25116 425 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 MDH2P40926 338 aaKnown RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 EIF3IQ13347 325 aaKnown RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 CXorf67Q86X51 503 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 TMEM178AQ8NBL3 297 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 ZPBPQ9BS86 351 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 SMDT1Q9H4I9 107 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 FREM1Q5H8C1 2179 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 PCNX2A6NKB5 2137 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 PGLYRP1O75594 196 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 CYB5R3P00387 301 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 RPL29P47914 159 aaKnown RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 SPINK14Q6IE38 97 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 KCNIP4Q6PIL6 250 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 FIP1L1Q6UN15 594 aaKnown RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 OR2V1Q8NHB1 315 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 ATG101Q9BSB4 218 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 FAM3BP58499 235 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 ZNF506Q5JVG8 444 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 ARV1Q9H2C2 271 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 VAX2Q9UIW0 290 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 PITPNC1Q9UKF7 332 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 CST2P09228 141 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 HIST1H1BP16401 226 aaKnown RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 PTGDSP41222 190 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 PNRC1Q12796 327 aaPredicted RBP11.49□□□□□ -0.57
SCAF4-201ENST00000286835 KCNMB1Q16558 191 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 SPSB3Q6PJ21 355 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 TMEM18Q96B42 140 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 TMEM204Q9BSN7 226 aa11.49□□□□□ -0.57
SCAF4-201ENST00000286835 MUC22E2RYF6 1773 aaPredicted RBP11.48□□□□□ -0.57
SCAF4-201ENST00000286835 LTBP2Q14767 1821 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 NDUFB7P17568 137 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 CEACAM6P40199 344 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 RSPO1Q2MKA7 263 aaPredicted RBP11.48□□□□□ -0.57
SCAF4-201ENST00000286835 FFAR4Q5NUL3 377 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 FAM78BQ5VT40 261 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 SLC23A3Q6PIS1 610 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 TMPRSS7Q7RTY8 843 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 OR10V1Q8NGI7 309 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 NABP1Q96AH0 204 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 OR1A1Q9P1Q5 309 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 TCAPO15273 167 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 MRPL49Q13405 166 aaKnown RBP11.48□□□□□ -0.57
SCAF4-201ENST00000286835 C10orf128Q5T292 105 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 H1FOOQ8IZA3 346 aaPredicted RBP11.48□□□□□ -0.57
SCAF4-201ENST00000286835 HIST3H2BBQ8N257 126 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 M1APQ8TC57 530 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 OR4C12Q96R67 309 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 SAMD10Q9BYL1 202 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 WNT5BQ9H1J7 359 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 GPR35Q9HC97 309 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 LOC102723971A0A1B0GUV8 181 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 SYNGR3O43761 229 aa11.48□□□□□ -0.57
SCAF4-201ENST00000286835 TMEM50AO95807 157 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms