RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CD300LBA8K4G0 201 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 TRA2AQ13595 282 aaKnown RBP eCLIP11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 IGFBP7Q16270 282 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 C4orf17Q53FE4 359 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 SPINK14Q6IE38 97 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 TCEAL6Q6IPX3 200 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 HAPLN4Q86UW8 402 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 OR10V1Q8NGI7 309 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 OR5P3Q8WZ94 311 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 GTF3AQ92664 365 aaKnown RBP11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 RCC1LQ96I51 464 aaKnown RBP11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 SSX3Q99909 188 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 LINC00470Q9BZP3 86 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 OR51B6Q9H340 312 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 LRFN1Q9P244 771 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 PPP1R3CQ9UQK1 317 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 TRBV6-6A0A0A6YYG2 114 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 PATE3B3GLJ2 98 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 CLDN34H7C241 214 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 CYB5R3P00387 301 aaPredicted RBP11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 CELA3AP09093 270 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 ZNF16P17020 682 aaPredicted RBP11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 FAM58AQ8N1B3 248 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 PRR18Q8N4B5 295 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 CA5BP1Q8WTZ4 195 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 PLK3Q9H4B4 646 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 OPA3Q9H6K4 179 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 DLL3Q9NYJ7 618 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 OR14J1Q9UGF5 321 aa11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 MRPS18CQ9Y3D5 142 aaKnown RBP11.25□□□□□ -0.61
SLC28A1-201ENST00000286749 SS18L1O75177 396 aaPredicted RBP11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 IGLV2-14P01704 120 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 PNRC1Q12796 327 aaPredicted RBP11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 LINC00596Q86U02 117 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 LILRB2Q8N423 598 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 OR1K1Q8NGR3 316 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 UBALD1Q8TB05 177 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 MBD3L1Q8WWY6 194 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 CABLES2Q9BTV7 478 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 ELOA3CA0A087WX78 387 aaPredicted RBP11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 CEBPZOSA8MTT3 80 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 NDUFS6O75380 124 aaKnown RBP11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 RHBDL1O75783 438 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 IGHEP01854 428 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 MDH2P40926 338 aaKnown RBP11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 RND2P52198 227 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 ELLP55199 621 aaPredicted RBP11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 ZNF880Q6PDB4 577 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 POM121L2Q96KW2 1035 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 PSMG3Q9BT73 122 aaPredicted RBP11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 PRDM13Q9H4Q3 707 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 SDF2L1Q9HCN8 221 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 DNAJC13O75165 2243 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 ARHGAP21Q5T5U3 1957 aa11.24□□□□□ -0.61
SLC28A1-201ENST00000286749 COX5BP10606 129 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 FABP4P15090 132 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 MDKP21741 143 aaPredicted RBP11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 MYPOPQ86VE0 399 aaPredicted RBP11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 LSM10Q969L4 123 aaKnown RBP11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 KCNS2Q9ULS6 477 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 OR5H1A6NKK0 313 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 ANKRD30BLA7E2S9 258 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 DEGS1O15121 323 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 LY86O95711 162 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 PTBP3O95758 552 aaKnown RBP11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 LHX2P50458 406 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 HBG1P69891 147 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 HBG2P69892 147 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 TESK1Q15569 626 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 LRRC75BQ2VPJ9 315 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 ZNF573Q86YE8 665 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 TMEM242Q9NWH2 141 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 RNF150Q9ULK6 438 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 BOKQ9UMX3 212 aaPredicted RBP11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 RBM7Q9Y580 266 aaKnown RBP11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 R4GN57 208 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 KMT2EQ8IZD2 1858 aa11.23□□□□□ -0.61
SLC28A1-201ENST00000286749 PIGBOS1A0A0B4J2F0 54 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 MAP1LC3B2A6NCE7 125 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 PGA5P0DJD9 388 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 PLA2G5P39877 138 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 GNG3P63215 75 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 DEFA6Q01524 100 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 SPANXN5Q5MJ07 72 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 MAP1LC3BQ9GZQ8 125 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 RBKSQ9H477 322 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 GFOD1Q9NXC2 390 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 VAX2Q9UIW0 290 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 HIST1H1BP16401 226 aaKnown RBP11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 CA6P23280 308 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 CLDN18P56856 261 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 HNF4GQ14541 408 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 ZNF585BQ52M93 769 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 TMEM41BQ5BJD5 291 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 BEND4Q6ZU67 534 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 MAFAQ8NHW3 353 aaPredicted RBP11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 CT55Q8WUE5 264 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 SNX22Q96L94 193 aa11.22□□□□□ -0.61
SLC28A1-201ENST00000286749 OR4C12Q96R67 309 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms