RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 OR4X1Q8NH49 305 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 NT5CQ8TCD5 201 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 TNFAIP8L1Q8WVP5 186 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 TMEM230Q96A57 120 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 SLC45A3Q96JT2 553 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 DCSTAMPQ9H295 470 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 FBXL15Q9H469 300 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 FAM96AQ9H5X1 160 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 TMEM138Q9NPI0 162 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 KCNIP1Q9NZI2 227 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 THYN1Q9P016 225 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 OR1A1Q9P1Q5 309 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 RARRES3Q9UL19 164 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 ZNF257Q9Y2Q1 563 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 HSPB11Q9Y547 144 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 PTPRBP23467 1997 aa3.62□□□□□ -1.83
CD44-202ENST00000278385 FRYLO94915 3013 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 NYNRINQ9P2P1 1898 aaKnown RBP3.61□□□□□ -1.83
CD44-202ENST00000278385 IGHV5-51A0A0C4DH38 117 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 TLCD2A6NGC4 264 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 FAM159BA6NKW6 160 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 ZNF726A6NNF4 738 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 EVPLLA8MZ36 301 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 LINC01619G3V211 115 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 J3QKU1 62 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 GPR75O95800 540 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 TSHBP01222 138 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 PRB1P04280 392 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 CRYGDP07320 174 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 SNRPCP09234 159 aaKnown RBP3.61□□□□□ -1.83
CD44-202ENST00000278385 SLC35G6P0C7Q6 338 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 SELEP16581 610 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 GGT1P19440 569 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 TCN2P20062 427 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 OR3A4PP47883 348 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 CSRP3P50461 194 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 RND2P52198 227 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 TCTAP57738 103 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 DSCR9P59020 149 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 RAB2AP61019 212 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 RAB5BP61020 215 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 NAA20P61599 178 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 IFITM2Q01629 132 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 MXD1Q05195 221 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 Q0VFX4 171 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 LY6DQ14210 128 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 NRF1Q16656 503 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 KLHL12Q53G59 568 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 OTPQ5XKR4 325 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 ZNF324BQ6AW86 544 aaPredicted RBP3.61□□□□□ -1.83
CD44-202ENST00000278385 Q6ZN92 141 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 RDH10Q8IZV5 341 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 LRRC18Q8N456 261 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 ZNF441Q8N8Z8 693 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 OR4E2Q8NGC2 313 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 OR10G9Q8NGN4 311 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 OR13G1Q8NGZ3 307 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 SSC4DQ8WTU2 575 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 C1orf54Q8WWF1 131 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 LCN9Q8WX39 176 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 C11orf52Q96A22 123 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 C9orf85Q96MD7 179 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 PFDN5Q99471 154 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 CMSS1Q9BQ75 279 aaKnown RBP3.61□□□□□ -1.83
CD44-202ENST00000278385 TAPBPLQ9BX59 468 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 ULBP3Q9BZM4 244 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 SRMSQ9H3Y6 488 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 LIME1Q9H400 295 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 KCNJ16Q9NPI9 418 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 LHX9Q9NQ69 397 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 SPRR3Q9UBC9 169 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 ZNF580Q9UK33 172 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 DKKL1Q9UK85 242 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 ANGPT4Q9Y264 503 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 ST3GAL6Q9Y274 331 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 BTRCQ9Y297 605 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 TP53TG5Q9Y2B4 290 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 FBXO7Q9Y3I1 522 aa3.61□□□□□ -1.83
CD44-202ENST00000278385 DOCK9Q9BZ29 2069 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 IGHV3-20A0A0C4DH32 117 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 TRIM49D1C9J1S8 452 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 H7C1H1 209 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 CCL22O00626 93 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 UPK1BO75841 260 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 OR7C1O76099 320 aaPredicted RBP3.6□□□□□ -1.83
CD44-202ENST00000278385 ATG12O94817 140 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 MT-CO2P00403 227 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 RENP00797 406 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 NGFP01138 241 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 IGKV1D-16P01601 117 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 SERPINA7P05543 415 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 OR10J4P0C629 311 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 IFI30P13284 250 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 HSD17B1P14061 328 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 PLA2G2AP14555 144 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 GNB3P16520 340 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 PSMB1P20618 241 aaKnown RBP3.6□□□□□ -1.83
CD44-202ENST00000278385 GZMHP20718 246 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 CXCR1P25024 350 aa3.6□□□□□ -1.83
CD44-202ENST00000278385 RPL22P35268 128 aaKnown RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms