RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 HOGA1Q86XE5 327 aa12.26□□□□□ -0.45
SCARF1-201ENST00000263071 LIPHQ8WWY8 451 aa12.26□□□□□ -0.45
SCARF1-201ENST00000263071 Q9N2K0 584 aa12.26□□□□□ -0.45
SCARF1-201ENST00000263071 MMP17Q9ULZ9 603 aa12.26□□□□□ -0.45
SCARF1-201ENST00000263071 SPTBN2O15020 2390 aa12.26□□□□□ -0.45
SCARF1-201ENST00000263071 IGKV3-11P04433 115 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 S100GP29377 79 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 SAXO1Q8IYX7 474 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 D2HGDHQ8N465 521 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 OR10W1Q8NGF6 305 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 PLK3Q9H4B4 646 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 C1orf123Q9NWV4 160 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 FAM206AQ9NX38 181 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 C2orf16Q68DN1 1984 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 SYNGR4O95473 234 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 IGHG1P01857 330 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 HBE1P02100 147 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 SLC38A9Q8NBW4 561 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 OR2T10Q8NGZ9 312 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 RBMXL1Q96E39 390 aaKnown RBP12.25□□□□□ -0.45
SCARF1-201ENST00000263071 CFHR5Q9BXR6 569 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 PLSCR4Q9NRQ2 329 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 CLEC1BQ9P126 229 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 TRAPPC1Q9Y5R8 145 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 LHFPL6Q9Y693 200 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 ONECUT2O95948 504 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 CNN3Q15417 329 aaKnown RBP12.25□□□□□ -0.45
SCARF1-201ENST00000263071 PCK2Q16822 640 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 Q7L0L9 218 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 STXBP6Q8NFX7 210 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 UBALD1Q8TB05 177 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 RNF133Q8WVZ7 376 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 B3GALT5Q9Y2C3 310 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 COL6A3P12111 3177 aa12.25□□□□□ -0.45
SCARF1-201ENST00000263071 H3BP45 60 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 DUSP1P28562 367 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 CDKN1AP38936 164 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 PIGPP57054 158 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 HOXB13Q92826 284 aaPredicted RBP12.24□□□□□ -0.45
SCARF1-201ENST00000263071 GPR132Q9UNW8 380 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 TPRP12270 2363 aaKnown RBP12.24□□□□□ -0.45
SCARF1-201ENST00000263071 GAGE12BA1L429 117 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 TIAF1O95411 115 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 PHF19Q5T6S3 580 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 SPSB3Q6PJ21 355 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 PRSS57Q6UWY2 283 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 KLHDC1Q8N7A1 406 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 OR5AU1Q8NGC0 362 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 SDF2L1Q9HCN8 221 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 RNF115Q9Y4L5 304 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 BLACEA4D250 179 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 C2CD4DB7Z1M9 353 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 MT-CO2P00403 227 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 MSR1P21757 451 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 SUPT4H1P63272 117 aaKnown RBP12.24□□□□□ -0.45
SCARF1-201ENST00000263071 MRPS21P82921 87 aaKnown RBP12.24□□□□□ -0.45
SCARF1-201ENST00000263071 C17orf67Q0P5P2 114 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 Q6ZWC4 215 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 LYZL2Q7Z4W2 148 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 UCN2Q96RP3 112 aa12.24□□□□□ -0.45
SCARF1-201ENST00000263071 FAM103A1Q9BTL3 118 aaKnown RBP12.24□□□□□ -0.45
SCARF1-201ENST00000263071 NCOA6Q14686 2063 aaPredicted RBP12.23□□□□□ -0.45
SCARF1-201ENST00000263071 SLC25A17O43808 307 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 SAP30O75446 220 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 HPNP05981 417 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 SMIM7Q9BQ49 75 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 DEFB126Q9BYW3 111 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 KIAA2026Q5HYC2 2103 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 A0A1W2PR80 420 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 ODAMA1E959 279 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 DIRC3C9JPN6 131 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 PHF1O43189 567 aaPredicted RBP12.23□□□□□ -0.45
SCARF1-201ENST00000263071 EFNA2O43921 213 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 NUPR1O60356 82 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 PDGFBP01127 241 aaPredicted RBP12.23□□□□□ -0.45
SCARF1-201ENST00000263071 PFN1P07737 140 aaKnown RBP12.23□□□□□ -0.45
SCARF1-201ENST00000263071 ATP6V0CP27449 155 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 PTGER4P35408 488 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 MLF1P58340 268 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 IGLV3-21P80748 117 aaPredicted RBP12.23□□□□□ -0.45
SCARF1-201ENST00000263071 C1orf100Q5SVJ3 147 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 CADM4Q8NFZ8 388 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 GPR146Q96CH1 333 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 KCNK17Q96T54 332 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 ATP5SQ99766 215 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 ZNF442Q9H7R0 627 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 MANBALQ9NQG1 85 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 RYDENQ9NUL5 291 aaKnown RBP12.23□□□□□ -0.45
SCARF1-201ENST00000263071 CST7O76096 145 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 ARF1P84077 181 aaKnown RBP12.23□□□□□ -0.45
SCARF1-201ENST00000263071 RBPJQ06330 500 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 CPT1CQ8TCG5 803 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 ZNF837Q96EG3 531 aaPredicted RBP12.23□□□□□ -0.45
SCARF1-201ENST00000263071 IMMP2LQ96T52 175 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 RTBDNQ9BSG5 229 aaPredicted RBP12.23□□□□□ -0.45
SCARF1-201ENST00000263071 OR51I2Q9H344 312 aa12.23□□□□□ -0.45
SCARF1-201ENST00000263071 GJE1A6NN92 205 aa12.22□□□□□ -0.45
SCARF1-201ENST00000263071 ETV2O00321 342 aaPredicted RBP12.22□□□□□ -0.45
SCARF1-201ENST00000263071 OR7C1O76099 320 aaPredicted RBP12.22□□□□□ -0.45
SCARF1-201ENST00000263071 PAFAH1B2P68402 229 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms