RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 EXTL1Q92935 676 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 LHX4Q969G2 390 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 FGF21Q9NSA1 209 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 TYMSP04818 313 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 SELEP16581 610 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 CDKN1BP46527 198 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 FUT6P51993 359 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 PLCXD3Q63HM9 321 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 ZNF525Q8N782 197 aa12.82□□□□□ -0.36
XRCC1-201ENST00000262887 ZNF837Q96EG3 531 aaPredicted RBP12.82□□□□□ -0.36
XRCC1-201ENST00000262887 YLPM1P49750 1951 aaKnown RBP12.81□□□□□ -0.36
XRCC1-201ENST00000262887 H0Y980 276 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 OR5I1Q13606 314 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 LRRC75BQ2VPJ9 315 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 C17orf82Q86X59 251 aaPredicted RBP12.81□□□□□ -0.36
XRCC1-201ENST00000262887 PINX1Q96BK5 328 aaKnown RBP12.81□□□□□ -0.36
XRCC1-201ENST00000262887 SLC39A9Q9NUM3 307 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 ZNF705FA8MVS1 300 aaPredicted RBP12.81□□□□□ -0.36
XRCC1-201ENST00000262887 ZNF705DP0CH99 300 aaPredicted RBP12.81□□□□□ -0.36
XRCC1-201ENST00000262887 ZNF705BP0CI00 300 aaPredicted RBP12.81□□□□□ -0.36
XRCC1-201ENST00000262887 SRP14P37108 136 aaKnown RBP12.81□□□□□ -0.36
XRCC1-201ENST00000262887 TLE1Q04724 770 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 RNPS1Q15287 305 aaKnown RBP12.81□□□□□ -0.36
XRCC1-201ENST00000262887 TMEM42Q69YG0 159 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 DEFB119Q8N690 84 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 RLN3Q8WXF3 142 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 PIGCQ92535 297 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 GPR146Q96CH1 333 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 PARLQ9H300 379 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 DNAJC4Q9NNZ3 241 aa12.81□□□□□ -0.36
XRCC1-201ENST00000262887 A8MXE2 369 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 TMEM250H0YL14 139 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 PIAS2O75928 621 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 HNF1AP20823 631 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 CFHR1Q03591 330 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 FAM27BQ5VT28 67 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 PRAMEF20Q5VT98 475 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 CALHM1Q8IU99 346 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 PLXDC1Q8IUK5 500 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 ZNF611Q8N823 705 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 IGHV1OR21-1A0A087WYE8 117 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 HPRT1P00492 218 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 IL6RP08887 468 aaPredicted RBP12.8□□□□□ -0.36
XRCC1-201ENST00000262887 IAPPP10997 89 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 PSMB3P49720 205 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 ZNF92Q03936 586 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 ARL16Q0P5N6 197 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 IZUMO4Q1ZYL8 232 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
XRCC1-201ENST00000262887 HLA-CQ95604 372 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 ZNF501Q96CX3 271 aaPredicted RBP12.8□□□□□ -0.36
XRCC1-201ENST00000262887 MS4A10Q96PG2 267 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 UCN2Q96RP3 112 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 TBX15Q96SF7 602 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 KIAA1324LA8MWY0 1029 aaPredicted RBP12.8□□□□□ -0.36
XRCC1-201ENST00000262887 SYNGR3O43761 229 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 FKBP2P26885 142 aaKnown RBP12.8□□□□□ -0.36
XRCC1-201ENST00000262887 DAZAP2Q15038 168 aaPredicted RBP12.8□□□□□ -0.36
XRCC1-201ENST00000262887 TESK1Q15569 626 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 KCNIP4Q6PIL6 250 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 Q6ZS49 121 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 OR1F12Q8NHA8 337 aa12.8□□□□□ -0.36
XRCC1-201ENST00000262887 PGLYRP1O75594 196 aaPredicted RBP12.79□□□□□ -0.36
XRCC1-201ENST00000262887 SERPINE2P07093 398 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 WNT5AP41221 380 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 HBG1P69891 147 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 HBG2P69892 147 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 OR51H1Q8NH63 302 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 PSENENQ9NZ42 101 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 CD207Q9UJ71 328 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 ZFP30Q9Y2G7 519 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 GYPAP02724 150 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 SLC25A6P12236 298 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 F2RP25116 425 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 PRDX4Q13162 271 aa12.79□□□□□ -0.36
XRCC1-201ENST00000262887 WDR61Q9GZS3 305 aaKnown RBP12.79□□□□□ -0.36
XRCC1-201ENST00000262887 HSPB6O14558 160 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 DUX1O43812 170 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 TUSC2O75896 110 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 ZFAND5O76080 213 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 S100GP29377 79 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 RHBDD2Q6NTF9 364 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 TMEM256Q8N2U0 113 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 FAM122AQ96E09 287 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 WNT16Q9UBV4 365 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 SYNGR2O43760 224 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 IGLV3-19P01714 112 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 PATE4P0C8F1 98 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 CD38P28907 300 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 LCN2P80188 198 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 RIPPLY2Q5TAB7 128 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 TIPARPQ7Z3E1 657 aaKnown RBP12.78□□□□□ -0.36
XRCC1-201ENST00000262887 HAPLN4Q86UW8 402 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 RPP25LQ8N5L8 163 aaKnown RBP12.78□□□□□ -0.36
XRCC1-201ENST00000262887 OR4F5Q8NH21 305 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 ZCCHC14Q8WYQ9 949 aaKnown RBP12.78□□□□□ -0.36
XRCC1-201ENST00000262887 SDSLQ96GA7 329 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 OR4F4Q96R69 305 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 IMMP2LQ96T52 175 aa12.78□□□□□ -0.36
XRCC1-201ENST00000262887 PCED1AQ9H1Q7 454 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms