RNA–Protein interactions for RNA: ENST00000261693.10

SCARB1-201, Transcript of scavenger receptor class B member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCARB1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-201ENST00000261693 RAB40CQ96S21 281 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 PFDN5Q99471 154 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 PSENENQ9NZ42 101 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 LRFN1Q9P244 771 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 PCSK5Q92824 1860 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 MDKP21741 143 aaPredicted RBP16.45■□□□□ 0.22
SCARB1-201ENST00000261693 OR2T2Q6IF00 324 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 OR5A2Q8NGI9 324 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 OR5P3Q8WZ94 311 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 FRZBQ92765 325 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 FAM210BQ96KR6 192 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 SSX3Q99909 188 aa16.45■□□□□ 0.22
SCARB1-201ENST00000261693 GTF3C1Q12789 2109 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 SYNGR2O43760 224 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 TRGC1P0CF51 173 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 ELLP55199 621 aaPredicted RBP16.44■□□□□ 0.22
SCARB1-201ENST00000261693 TCEAL6Q6IPX3 200 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 FAM58AQ8N1B3 248 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 ABHD5Q8WTS1 349 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 DLL3Q9NYJ7 618 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 RBM7Q9Y580 266 aaKnown RBP16.44■□□□□ 0.22
SCARB1-201ENST00000261693 TRAV1-1A0A0B4J248 108 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 FAM166BA8MTA8 275 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 PPP1R2P9O14990 202 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 IGLV2-14P01704 120 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 TRA2AQ13595 282 aaKnown RBP eCLIP16.44■□□□□ 0.22
SCARB1-201ENST00000261693 NRN1LQ496H8 165 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 SPATA46Q5T0L3 261 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 HAPLN4Q86UW8 402 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 OR10V1Q8NGI7 309 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 KCNS2Q9ULS6 477 aa16.44■□□□□ 0.22
SCARB1-201ENST00000261693 USF3Q68DE3 2245 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 IGHV3-64DA0A0J9YX35 117 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 IGKV1-5P01602 117 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 RNPS1Q15287 305 aaKnown RBP16.43■□□□□ 0.22
SCARB1-201ENST00000261693 ZNF880Q6PDB4 577 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 ZNF525Q8N782 197 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 RCC1LQ96I51 464 aaKnown RBP16.43■□□□□ 0.22
SCARB1-201ENST00000261693 RIMS4Q9H426 269 aaPredicted RBP16.43■□□□□ 0.22
SCARB1-201ENST00000261693 PLK3Q9H4B4 646 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 CISD1Q9NZ45 108 aaKnown RBP16.43■□□□□ 0.22
SCARB1-201ENST00000261693 LY86O95711 162 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 CA6P23280 308 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 VASH2Q86V25 355 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 LILRB2Q8N423 598 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 OR14J1Q9UGF5 321 aa16.43■□□□□ 0.22
SCARB1-201ENST00000261693 IGKV3D-15A0A087WSY6 115 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 CEBPZOSA8MTT3 80 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 SEC14L6B5MCN3 397 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 NDUFS6O75380 124 aaKnown RBP16.42■□□□□ 0.22
SCARB1-201ENST00000261693 LHX2P50458 406 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 SPANXN5Q5MJ07 72 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 BEND4Q6ZU67 534 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 TIPARPQ7Z3E1 657 aaKnown RBP16.42■□□□□ 0.22
SCARB1-201ENST00000261693 C1orf87Q8N0U7 546 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 HIST3H2BBQ8N257 126 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 CT55Q8WUE5 264 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 POM121L2Q96KW2 1035 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 NBEAQ8NFP9 2946 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 ANKRD30BLA7E2S9 258 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 DEGS1O15121 323 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 WDR1O75083 606 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 C3AR1Q16581 482 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 THOC3Q96J01 351 aaKnown RBP16.42■□□□□ 0.22
SCARB1-201ENST00000261693 HIPK2Q9H2X6 1198 aa16.42■□□□□ 0.22
SCARB1-201ENST00000261693 BOKQ9UMX3 212 aaPredicted RBP16.42■□□□□ 0.22
SCARB1-201ENST00000261693 SIRPB1O00241 398 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 FABP4P15090 132 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 TESK1Q15569 626 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 OR10G4Q8NGN3 311 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 CA5BP1Q8WTZ4 195 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 LINC00470Q9BZP3 86 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 ZDBF2Q9HCK1 2354 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 ZNF729A6NN14 1252 aaPredicted RBP16.41■□□□□ 0.22
SCARB1-201ENST00000261693 B4DEV8 164 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 CLDN34H7C241 214 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 WNT5AP41221 380 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 CLDN18P56856 261 aa16.41■□□□□ 0.22
SCARB1-201ENST00000261693 MED13Q9UHV7 2174 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 HMGB3O15347 200 aaKnown RBP16.4■□□□□ 0.22
SCARB1-201ENST00000261693 IGHEP01854 428 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 SERPINA7P05543 415 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 MDH2P40926 338 aaKnown RBP16.4■□□□□ 0.22
SCARB1-201ENST00000261693 MAGEA5P43359 124 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 ZNF573Q86YE8 665 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 GTF3AQ92664 365 aaKnown RBP16.4■□□□□ 0.22
SCARB1-201ENST00000261693 RBKSQ9H477 322 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 TREM2Q9NZC2 230 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 MRPS18CQ9Y3D5 142 aaKnown RBP16.4■□□□□ 0.22
SCARB1-201ENST00000261693 KNTC1P50748 2209 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 SS18L1O75177 396 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-201ENST00000261693 CYB5R3P00387 301 aaPredicted RBP16.4■□□□□ 0.22
SCARB1-201ENST00000261693 PGA5P0DJD9 388 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 SLC25A6P12236 298 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 GNG3P63215 75 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 ZNF585BQ52M93 769 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 DCAF12Q5T6F0 453 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 OR8G2PQ6IF36 304 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 OR2M7Q8NG81 312 aa16.4■□□□□ 0.22
SCARB1-201ENST00000261693 HLA-CQ95604 372 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms